Protein–RNA interactions for Protein: Q5VVJ2

MYSM1, Histone H2A deubiquitinase MYSM1, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYSM1Q5VVJ2 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MYSM1Q5VVJ2 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.45■■□□□ 1.02
MYSM1Q5VVJ2 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
MYSM1Q5VVJ2 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
MYSM1Q5VVJ2 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
MYSM1Q5VVJ2 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.45■■□□□ 1.02
MYSM1Q5VVJ2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.45■■□□□ 1.02
MYSM1Q5VVJ2 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MYSM1Q5VVJ2 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MYSM1Q5VVJ2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
MYSM1Q5VVJ2 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC21.44■■□□□ 1.02
MYSM1Q5VVJ2 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
MYSM1Q5VVJ2 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
MYSM1Q5VVJ2 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MYSM1Q5VVJ2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
MYSM1Q5VVJ2 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
MYSM1Q5VVJ2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
MYSM1Q5VVJ2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MYSM1Q5VVJ2 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21.44■■□□□ 1.02
MYSM1Q5VVJ2 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC21.44■■□□□ 1.02
MYSM1Q5VVJ2 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MYSM1Q5VVJ2 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.44■■□□□ 1.02
MYSM1Q5VVJ2 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MYSM1Q5VVJ2 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.44■■□□□ 1.02
MYSM1Q5VVJ2 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
MYSM1Q5VVJ2 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
MYSM1Q5VVJ2 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.44■■□□□ 1.02
MYSM1Q5VVJ2 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.44■■□□□ 1.02
MYSM1Q5VVJ2 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.44■■□□□ 1.02
MYSM1Q5VVJ2 AL441883.1-201ENST00000566170 1045 ntBASIC21.44■■□□□ 1.02
MYSM1Q5VVJ2 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.44■■□□□ 1.02
MYSM1Q5VVJ2 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.44■■□□□ 1.02
MYSM1Q5VVJ2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
MYSM1Q5VVJ2 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.44■■□□□ 1.02
MYSM1Q5VVJ2 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MYSM1Q5VVJ2 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.44■■□□□ 1.02
MYSM1Q5VVJ2 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MYSM1Q5VVJ2 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.44■■□□□ 1.02
MYSM1Q5VVJ2 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
MYSM1Q5VVJ2 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
MYSM1Q5VVJ2 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.44■■□□□ 1.02
MYSM1Q5VVJ2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
MYSM1Q5VVJ2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MYSM1Q5VVJ2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MYSM1Q5VVJ2 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MYSM1Q5VVJ2 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MYSM1Q5VVJ2 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
MYSM1Q5VVJ2 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.43■■□□□ 1.02
MYSM1Q5VVJ2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
MYSM1Q5VVJ2 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.43■■□□□ 1.02
MYSM1Q5VVJ2 AIRN-201ENST00000601203 4374 ntBASIC21.43■■□□□ 1.02
MYSM1Q5VVJ2 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MYSM1Q5VVJ2 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
MYSM1Q5VVJ2 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.43■■□□□ 1.02
MYSM1Q5VVJ2 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.43■■□□□ 1.02
MYSM1Q5VVJ2 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.43■■□□□ 1.02
MYSM1Q5VVJ2 AL023973.1-201ENST00000624619 620 ntBASIC21.43■■□□□ 1.02
MYSM1Q5VVJ2 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
MYSM1Q5VVJ2 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MYSM1Q5VVJ2 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.43■■□□□ 1.02
MYSM1Q5VVJ2 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
MYSM1Q5VVJ2 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.43■■□□□ 1.02
MYSM1Q5VVJ2 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
MYSM1Q5VVJ2 AL109659.2-201ENST00000606809 1674 ntBASIC21.43■■□□□ 1.02
MYSM1Q5VVJ2 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
MYSM1Q5VVJ2 AC008556.1-201ENST00000610908 2040 ntBASIC21.43■■□□□ 1.02
MYSM1Q5VVJ2 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
MYSM1Q5VVJ2 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
MYSM1Q5VVJ2 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
MYSM1Q5VVJ2 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
MYSM1Q5VVJ2 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
MYSM1Q5VVJ2 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.42■■□□□ 1.02
MYSM1Q5VVJ2 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
MYSM1Q5VVJ2 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
MYSM1Q5VVJ2 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
MYSM1Q5VVJ2 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.42■■□□□ 1.02
MYSM1Q5VVJ2 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
MYSM1Q5VVJ2 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC21.42■■□□□ 1.02
MYSM1Q5VVJ2 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.42■■□□□ 1.02
MYSM1Q5VVJ2 AC112777.1-201ENST00000540175 1423 ntBASIC21.42■■□□□ 1.02
MYSM1Q5VVJ2 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
MYSM1Q5VVJ2 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
MYSM1Q5VVJ2 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.42■■□□□ 1.02
MYSM1Q5VVJ2 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
MYSM1Q5VVJ2 AC140113.3-201ENST00000605663 199 ntBASIC21.42■■□□□ 1.02
MYSM1Q5VVJ2 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
MYSM1Q5VVJ2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
MYSM1Q5VVJ2 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
MYSM1Q5VVJ2 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
MYSM1Q5VVJ2 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MYSM1Q5VVJ2 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
MYSM1Q5VVJ2 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
MYSM1Q5VVJ2 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
MYSM1Q5VVJ2 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.41■■□□□ 1.02
MYSM1Q5VVJ2 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MYSM1Q5VVJ2 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
MYSM1Q5VVJ2 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MYSM1Q5VVJ2 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
MYSM1Q5VVJ2 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MYSM1Q5VVJ2 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms