Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.2■□□□□ 0.66
LRRC38Q5VT99 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC38Q5VT99 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC38Q5VT99 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC38Q5VT99 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.2■□□□□ 0.66
LRRC38Q5VT99 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC38Q5VT99 KRT17P2-201ENST00000300992 1314 ntBASIC19.2■□□□□ 0.66
LRRC38Q5VT99 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC38Q5VT99 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC38Q5VT99 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC38Q5VT99 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC38Q5VT99 FLJ13224-201ENST00000313737 1514 ntBASIC19.2■□□□□ 0.66
LRRC38Q5VT99 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LRRC38Q5VT99 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.19■□□□□ 0.66
LRRC38Q5VT99 AC020763.4-201ENST00000623414 4170 ntBASIC19.19■□□□□ 0.66
LRRC38Q5VT99 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LRRC38Q5VT99 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC38Q5VT99 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC38Q5VT99 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.19■□□□□ 0.66
LRRC38Q5VT99 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.19■□□□□ 0.66
LRRC38Q5VT99 KRT18P23-201ENST00000435622 1283 ntBASIC19.19■□□□□ 0.66
LRRC38Q5VT99 AC007663.1-201ENST00000438948 1240 ntBASIC19.19■□□□□ 0.66
LRRC38Q5VT99 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC38Q5VT99 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.19■□□□□ 0.66
LRRC38Q5VT99 MIR3180-4-201ENST00000582223 153 ntBASIC19.19■□□□□ 0.66
LRRC38Q5VT99 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC38Q5VT99 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LRRC38Q5VT99 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC38Q5VT99 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
LRRC38Q5VT99 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.19■□□□□ 0.66
LRRC38Q5VT99 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC38Q5VT99 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC38Q5VT99 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC38Q5VT99 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.19■□□□□ 0.66
LRRC38Q5VT99 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC38Q5VT99 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC38Q5VT99 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC38Q5VT99 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.19■□□□□ 0.66
LRRC38Q5VT99 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LRRC38Q5VT99 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC38Q5VT99 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC38Q5VT99 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
LRRC38Q5VT99 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC38Q5VT99 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC38Q5VT99 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.18■□□□□ 0.66
LRRC38Q5VT99 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC38Q5VT99 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC38Q5VT99 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LRRC38Q5VT99 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC38Q5VT99 TSPY14P-201ENST00000303979 915 ntBASIC19.18■□□□□ 0.66
LRRC38Q5VT99 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC38Q5VT99 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.18■□□□□ 0.66
LRRC38Q5VT99 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.18■□□□□ 0.66
LRRC38Q5VT99 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.18■□□□□ 0.66
LRRC38Q5VT99 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC38Q5VT99 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.18■□□□□ 0.66
LRRC38Q5VT99 C2orf69P3-201ENST00000565542 1120 ntBASIC19.18■□□□□ 0.66
LRRC38Q5VT99 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.18■□□□□ 0.66
LRRC38Q5VT99 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
LRRC38Q5VT99 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.18■□□□□ 0.66
LRRC38Q5VT99 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.18■□□□□ 0.66
LRRC38Q5VT99 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.18■□□□□ 0.66
LRRC38Q5VT99 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC38Q5VT99 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC38Q5VT99 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC38Q5VT99 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC38Q5VT99 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC38Q5VT99 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.18■□□□□ 0.66
LRRC38Q5VT99 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.18■□□□□ 0.66
LRRC38Q5VT99 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC38Q5VT99 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC38Q5VT99 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC38Q5VT99 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC38Q5VT99 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC38Q5VT99 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC38Q5VT99 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
LRRC38Q5VT99 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.17■□□□□ 0.66
LRRC38Q5VT99 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
LRRC38Q5VT99 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
LRRC38Q5VT99 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.17■□□□□ 0.66
LRRC38Q5VT99 PHGDH-209ENST00000641074 1780 ntBASIC19.17■□□□□ 0.66
LRRC38Q5VT99 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.17■□□□□ 0.66
LRRC38Q5VT99 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
LRRC38Q5VT99 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LRRC38Q5VT99 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.17■□□□□ 0.66
LRRC38Q5VT99 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC38Q5VT99 MIR1238-201ENST00000408483 83 ntBASIC19.17■□□□□ 0.66
LRRC38Q5VT99 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
LRRC38Q5VT99 AL390955.1-201ENST00000428694 934 ntBASIC19.17■□□□□ 0.66
LRRC38Q5VT99 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC38Q5VT99 AC009065.1-201ENST00000564055 1225 ntBASIC19.17■□□□□ 0.66
LRRC38Q5VT99 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.17■□□□□ 0.66
LRRC38Q5VT99 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC38Q5VT99 REXO1L9P-201ENST00000604264 2108 ntBASIC19.17■□□□□ 0.66
LRRC38Q5VT99 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.17■□□□□ 0.66
LRRC38Q5VT99 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LRRC38Q5VT99 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC38Q5VT99 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC38Q5VT99 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC38Q5VT99 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms