Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.97■□□□□ 0.15
LRRK2Q5S007 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRK2Q5S007 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRRK2Q5S007 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
LRRK2Q5S007 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRK2Q5S007 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
LRRK2Q5S007 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRK2Q5S007 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRRK2Q5S007 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
LRRK2Q5S007 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.97■□□□□ 0.15
LRRK2Q5S007 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRRK2Q5S007 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC15.97■□□□□ 0.15
LRRK2Q5S007 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.97■□□□□ 0.15
LRRK2Q5S007 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRK2Q5S007 STK25-234ENST00000535007 2459 ntTSL 2 BASIC15.97■□□□□ 0.15
LRRK2Q5S007 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.97■□□□□ 0.15
LRRK2Q5S007 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.97■□□□□ 0.15
LRRK2Q5S007 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRK2Q5S007 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
LRRK2Q5S007 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.97■□□□□ 0.15
LRRK2Q5S007 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRRK2Q5S007 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRK2Q5S007 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRK2Q5S007 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LRRK2Q5S007 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRRK2Q5S007 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRK2Q5S007 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRRK2Q5S007 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC15.96■□□□□ 0.15
LRRK2Q5S007 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC15.96■□□□□ 0.15
LRRK2Q5S007 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.96■□□□□ 0.15
LRRK2Q5S007 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
LRRK2Q5S007 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.96■□□□□ 0.15
LRRK2Q5S007 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
LRRK2Q5S007 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRK2Q5S007 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.96■□□□□ 0.15
LRRK2Q5S007 AC136632.2-201ENST00000512891 861 ntBASIC15.96■□□□□ 0.15
LRRK2Q5S007 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.96■□□□□ 0.15
LRRK2Q5S007 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRRK2Q5S007 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.96■□□□□ 0.15
LRRK2Q5S007 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.96■□□□□ 0.15
LRRK2Q5S007 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
LRRK2Q5S007 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRK2Q5S007 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRK2Q5S007 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRRK2Q5S007 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
LRRK2Q5S007 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRK2Q5S007 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
LRRK2Q5S007 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.96■□□□□ 0.14
LRRK2Q5S007 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.96■□□□□ 0.14
LRRK2Q5S007 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.96■□□□□ 0.14
LRRK2Q5S007 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRK2Q5S007 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC15.95■□□□□ 0.14
LRRK2Q5S007 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRRK2Q5S007 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRK2Q5S007 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRRK2Q5S007 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.95■□□□□ 0.14
LRRK2Q5S007 AC125634.1-201ENST00000438758 1403 ntBASIC15.95■□□□□ 0.14
LRRK2Q5S007 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRRK2Q5S007 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRK2Q5S007 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRK2Q5S007 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRRK2Q5S007 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.95■□□□□ 0.14
LRRK2Q5S007 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.95■□□□□ 0.14
LRRK2Q5S007 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
LRRK2Q5S007 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.95■□□□□ 0.14
LRRK2Q5S007 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.95■□□□□ 0.14
LRRK2Q5S007 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRK2Q5S007 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRK2Q5S007 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.95■□□□□ 0.14
LRRK2Q5S007 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC15.95■□□□□ 0.14
LRRK2Q5S007 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRK2Q5S007 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
LRRK2Q5S007 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.95■□□□□ 0.14
LRRK2Q5S007 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRRK2Q5S007 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
LRRK2Q5S007 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRK2Q5S007 GK-202ENST00000378941 458 ntTSL 3 BASIC15.95■□□□□ 0.14
LRRK2Q5S007 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRK2Q5S007 AC113404.2-201ENST00000507884 177 ntBASIC15.95■□□□□ 0.14
LRRK2Q5S007 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRRK2Q5S007 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.95■□□□□ 0.14
LRRK2Q5S007 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRK2Q5S007 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
LRRK2Q5S007 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRK2Q5S007 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRK2Q5S007 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRK2Q5S007 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.94■□□□□ 0.14
LRRK2Q5S007 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRK2Q5S007 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.94■□□□□ 0.14
LRRK2Q5S007 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.94■□□□□ 0.14
LRRK2Q5S007 AC018845.2-201ENST00000568326 409 ntBASIC15.94■□□□□ 0.14
LRRK2Q5S007 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.94■□□□□ 0.14
LRRK2Q5S007 MTDHP4-201ENST00000600287 670 ntBASIC15.94■□□□□ 0.14
LRRK2Q5S007 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LRRK2Q5S007 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
LRRK2Q5S007 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
LRRK2Q5S007 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRK2Q5S007 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
LRRK2Q5S007 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRK2Q5S007 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms