Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN20Q4JDL3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN20Q4JDL3 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PTPN20Q4JDL3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN20Q4JDL3 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.45■□□□□ 0.7
PTPN20Q4JDL3 AL023973.1-201ENST00000624619 620 ntBASIC19.45■□□□□ 0.7
PTPN20Q4JDL3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.45■□□□□ 0.7
PTPN20Q4JDL3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PTPN20Q4JDL3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN20Q4JDL3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PTPN20Q4JDL3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN20Q4JDL3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
PTPN20Q4JDL3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
PTPN20Q4JDL3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN20Q4JDL3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN20Q4JDL3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN20Q4JDL3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
PTPN20Q4JDL3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.45■□□□□ 0.7
PTPN20Q4JDL3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.44■□□□□ 0.7
PTPN20Q4JDL3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN20Q4JDL3 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN20Q4JDL3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN20Q4JDL3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN20Q4JDL3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.44■□□□□ 0.7
PTPN20Q4JDL3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN20Q4JDL3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.44■□□□□ 0.7
PTPN20Q4JDL3 AC009102.3-201ENST00000623118 1491 ntBASIC19.44■□□□□ 0.7
PTPN20Q4JDL3 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN20Q4JDL3 MIR149-201ENST00000384879 89 ntBASIC19.44■□□□□ 0.7
PTPN20Q4JDL3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.44■□□□□ 0.7
PTPN20Q4JDL3 AL137013.1-201ENST00000432946 1228 ntBASIC19.44■□□□□ 0.7
PTPN20Q4JDL3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.44■□□□□ 0.7
PTPN20Q4JDL3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN20Q4JDL3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.44■□□□□ 0.7
PTPN20Q4JDL3 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN20Q4JDL3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.44■□□□□ 0.7
PTPN20Q4JDL3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.44■□□□□ 0.7
PTPN20Q4JDL3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN20Q4JDL3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN20Q4JDL3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN20Q4JDL3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN20Q4JDL3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
PTPN20Q4JDL3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.44■□□□□ 0.7
PTPN20Q4JDL3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PTPN20Q4JDL3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN20Q4JDL3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PTPN20Q4JDL3 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.43■□□□□ 0.7
PTPN20Q4JDL3 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN20Q4JDL3 AC135776.1-201ENST00000319817 2481 ntBASIC19.43■□□□□ 0.7
PTPN20Q4JDL3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PTPN20Q4JDL3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.43■□□□□ 0.7
PTPN20Q4JDL3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN20Q4JDL3 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN20Q4JDL3 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN20Q4JDL3 LIN28AP1-201ENST00000429574 405 ntBASIC19.43■□□□□ 0.7
PTPN20Q4JDL3 KRT18P57-201ENST00000443599 1254 ntBASIC19.43■□□□□ 0.7
PTPN20Q4JDL3 ATP5G1P1-201ENST00000448724 379 ntBASIC19.43■□□□□ 0.7
PTPN20Q4JDL3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.43■□□□□ 0.7
PTPN20Q4JDL3 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.43■□□□□ 0.7
PTPN20Q4JDL3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.43■□□□□ 0.7
PTPN20Q4JDL3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PTPN20Q4JDL3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PTPN20Q4JDL3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN20Q4JDL3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.43■□□□□ 0.7
PTPN20Q4JDL3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN20Q4JDL3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN20Q4JDL3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN20Q4JDL3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PTPN20Q4JDL3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.43■□□□□ 0.7
PTPN20Q4JDL3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN20Q4JDL3 AL354751.1-201ENST00000412768 1863 ntBASIC19.43■□□□□ 0.7
PTPN20Q4JDL3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.43■□□□□ 0.7
PTPN20Q4JDL3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN20Q4JDL3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN20Q4JDL3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN20Q4JDL3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PTPN20Q4JDL3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PTPN20Q4JDL3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.42■□□□□ 0.7
PTPN20Q4JDL3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN20Q4JDL3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.42■□□□□ 0.7
PTPN20Q4JDL3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.42■□□□□ 0.7
PTPN20Q4JDL3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.42■□□□□ 0.7
PTPN20Q4JDL3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
PTPN20Q4JDL3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN20Q4JDL3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.42■□□□□ 0.7
PTPN20Q4JDL3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN20Q4JDL3 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN20Q4JDL3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.42■□□□□ 0.7
PTPN20Q4JDL3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN20Q4JDL3 GCSHP2-201ENST00000560971 527 ntBASIC19.42■□□□□ 0.7
PTPN20Q4JDL3 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.42■□□□□ 0.7
PTPN20Q4JDL3 MIR3180-4-201ENST00000582223 153 ntBASIC19.42■□□□□ 0.7
PTPN20Q4JDL3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
PTPN20Q4JDL3 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PTPN20Q4JDL3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.42■□□□□ 0.7
PTPN20Q4JDL3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN20Q4JDL3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.42■□□□□ 0.7
PTPN20Q4JDL3 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN20Q4JDL3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN20Q4JDL3 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms