Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
AP1S1P61966 HLA-F-220ENST00000434407 884 ntBASIC18.58■□□□□ 0.56
AP1S1P61966 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.58■□□□□ 0.56
AP1S1P61966 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP1S1P61966 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP1S1P61966 KRT18P35-201ENST00000510488 1269 ntBASIC18.58■□□□□ 0.56
AP1S1P61966 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.58■□□□□ 0.56
AP1S1P61966 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
AP1S1P61966 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.58■□□□□ 0.56
AP1S1P61966 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.58■□□□□ 0.56
AP1S1P61966 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.58■□□□□ 0.56
AP1S1P61966 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.58■□□□□ 0.56
AP1S1P61966 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
AP1S1P61966 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP1S1P61966 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP1S1P61966 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP1S1P61966 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.58■□□□□ 0.56
AP1S1P61966 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.58■□□□□ 0.56
AP1S1P61966 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP1S1P61966 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP1S1P61966 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP1S1P61966 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP1S1P61966 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.57■□□□□ 0.56
AP1S1P61966 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP1S1P61966 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP1S1P61966 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP1S1P61966 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP1S1P61966 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP1S1P61966 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.57■□□□□ 0.56
AP1S1P61966 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
AP1S1P61966 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP1S1P61966 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.57■□□□□ 0.56
AP1S1P61966 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP1S1P61966 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP1S1P61966 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.57■□□□□ 0.56
AP1S1P61966 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.57■□□□□ 0.56
AP1S1P61966 AC092597.1-201ENST00000487352 616 ntBASIC18.57■□□□□ 0.56
AP1S1P61966 AC087388.1-201ENST00000571370 1112 ntBASIC18.57■□□□□ 0.56
AP1S1P61966 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
AP1S1P61966 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.57■□□□□ 0.56
AP1S1P61966 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP1S1P61966 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP1S1P61966 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP1S1P61966 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP1S1P61966 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
AP1S1P61966 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP1S1P61966 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP1S1P61966 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.57■□□□□ 0.56
AP1S1P61966 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP1S1P61966 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
AP1S1P61966 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.57■□□□□ 0.56
AP1S1P61966 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
AP1S1P61966 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
AP1S1P61966 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP1S1P61966 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
AP1S1P61966 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AP1S1P61966 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP1S1P61966 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
AP1S1P61966 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AP1S1P61966 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP1S1P61966 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP1S1P61966 AL031133.1-201ENST00000406807 723 ntBASIC18.56■□□□□ 0.56
AP1S1P61966 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.56■□□□□ 0.56
AP1S1P61966 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.56■□□□□ 0.56
AP1S1P61966 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.56■□□□□ 0.56
AP1S1P61966 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
AP1S1P61966 AL445228.2-201ENST00000605589 952 ntBASIC18.56■□□□□ 0.56
AP1S1P61966 AC083849.1-201ENST00000615227 514 ntBASIC18.56■□□□□ 0.56
AP1S1P61966 AL121956.5-201ENST00000625261 221 ntBASIC18.56■□□□□ 0.56
AP1S1P61966 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AP1S1P61966 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP1S1P61966 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
AP1S1P61966 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AP1S1P61966 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP1S1P61966 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP1S1P61966 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AP1S1P61966 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.56■□□□□ 0.56
AP1S1P61966 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
AP1S1P61966 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
AP1S1P61966 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP1S1P61966 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.55■□□□□ 0.56
AP1S1P61966 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP1S1P61966 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.55■□□□□ 0.56
AP1S1P61966 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP1S1P61966 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP1S1P61966 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP1S1P61966 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP1S1P61966 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.55■□□□□ 0.56
AP1S1P61966 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.55■□□□□ 0.56
AP1S1P61966 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
AP1S1P61966 ZNF444P1-201ENST00000559497 298 ntBASIC18.55■□□□□ 0.56
AP1S1P61966 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
AP1S1P61966 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.55■□□□□ 0.56
AP1S1P61966 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.55■□□□□ 0.56
AP1S1P61966 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
AP1S1P61966 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.55■□□□□ 0.56
AP1S1P61966 AC138932.1-201ENST00000534164 6830 ntBASIC18.55■□□□□ 0.56
AP1S1P61966 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP1S1P61966 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP1S1P61966 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms