Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H2BDP58876 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H2BDP58876 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H2BDP58876 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H2BDP58876 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H2BDP58876 AC022188.1-201ENST00000620960 1664 ntBASIC13.95□□□□□ -0.18
HIST1H2BDP58876 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
HIST1H2BDP58876 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H2BDP58876 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
HIST1H2BDP58876 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H2BDP58876 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H2BDP58876 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H2BDP58876 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC13.95□□□□□ -0.18
HIST1H2BDP58876 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H2BDP58876 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
HIST1H2BDP58876 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
HIST1H2BDP58876 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.95□□□□□ -0.18
HIST1H2BDP58876 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H2BDP58876 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H2BDP58876 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H2BDP58876 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
HIST1H2BDP58876 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
HIST1H2BDP58876 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC13.95□□□□□ -0.18
HIST1H2BDP58876 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
HIST1H2BDP58876 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H2BDP58876 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H2BDP58876 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H2BDP58876 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
HIST1H2BDP58876 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H2BDP58876 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H2BDP58876 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H2BDP58876 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H2BDP58876 LYSMD4-203ENST00000378904 2122 ntBASIC13.94□□□□□ -0.18
HIST1H2BDP58876 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H2BDP58876 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H2BDP58876 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
HIST1H2BDP58876 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
HIST1H2BDP58876 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC13.94□□□□□ -0.18
HIST1H2BDP58876 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.94□□□□□ -0.18
HIST1H2BDP58876 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H2BDP58876 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H2BDP58876 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H2BDP58876 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC13.94□□□□□ -0.18
HIST1H2BDP58876 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC13.94□□□□□ -0.18
HIST1H2BDP58876 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H2BDP58876 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC13.94□□□□□ -0.18
HIST1H2BDP58876 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H2BDP58876 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H2BDP58876 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
HIST1H2BDP58876 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H2BDP58876 BEX3-202ENST00000372634 753 ntTSL 2 BASIC13.94□□□□□ -0.18
HIST1H2BDP58876 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC13.94□□□□□ -0.18
HIST1H2BDP58876 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H2BDP58876 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.94□□□□□ -0.18
HIST1H2BDP58876 AC074183.2-201ENST00000623112 922 ntBASIC13.94□□□□□ -0.18
HIST1H2BDP58876 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H2BDP58876 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H2BDP58876 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
HIST1H2BDP58876 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H2BDP58876 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H2BDP58876 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H2BDP58876 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
HIST1H2BDP58876 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H2BDP58876 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H2BDP58876 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC13.94□□□□□ -0.18
HIST1H2BDP58876 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H2BDP58876 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H2BDP58876 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.94□□□□□ -0.18
HIST1H2BDP58876 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H2BDP58876 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H2BDP58876 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2BDP58876 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2BDP58876 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2BDP58876 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2BDP58876 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HIST1H2BDP58876 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2BDP58876 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC13.93□□□□□ -0.18
HIST1H2BDP58876 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2BDP58876 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2BDP58876 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
HIST1H2BDP58876 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.93□□□□□ -0.18
HIST1H2BDP58876 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2BDP58876 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HIST1H2BDP58876 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2BDP58876 ANKRD18DP-204ENST00000455355 1975 ntBASIC13.93□□□□□ -0.18
HIST1H2BDP58876 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2BDP58876 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2BDP58876 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2BDP58876 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2BDP58876 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2BDP58876 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
HIST1H2BDP58876 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC13.93□□□□□ -0.18
HIST1H2BDP58876 DUX4L18-201ENST00000553347 1267 ntBASIC13.93□□□□□ -0.18
HIST1H2BDP58876 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
HIST1H2BDP58876 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC13.93□□□□□ -0.18
HIST1H2BDP58876 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2BDP58876 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC13.93□□□□□ -0.18
HIST1H2BDP58876 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2BDP58876 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.93□□□□□ -0.18
HIST1H2BDP58876 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms