Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CMC4P56277 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CMC4P56277 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC13.78□□□□□ -0.2
CMC4P56277 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CMC4P56277 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CMC4P56277 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CMC4P56277 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
CMC4P56277 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CMC4P56277 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CMC4P56277 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
CMC4P56277 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CMC4P56277 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CMC4P56277 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CMC4P56277 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CMC4P56277 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CMC4P56277 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC13.77□□□□□ -0.21
CMC4P56277 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CMC4P56277 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CMC4P56277 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CMC4P56277 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC13.77□□□□□ -0.21
CMC4P56277 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CMC4P56277 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CMC4P56277 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CMC4P56277 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC13.77□□□□□ -0.21
CMC4P56277 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC13.77□□□□□ -0.21
CMC4P56277 CROCCP1-201ENST00000426910 5675 ntBASIC13.77□□□□□ -0.21
CMC4P56277 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC13.77□□□□□ -0.21
CMC4P56277 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC13.77□□□□□ -0.21
CMC4P56277 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC13.77□□□□□ -0.21
CMC4P56277 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CMC4P56277 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC13.77□□□□□ -0.21
CMC4P56277 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CMC4P56277 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC13.77□□□□□ -0.21
CMC4P56277 AC063952.2-201ENST00000498792 1227 ntBASIC13.77□□□□□ -0.21
CMC4P56277 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CMC4P56277 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC13.77□□□□□ -0.21
CMC4P56277 CD81-212ENST00000526072 1172 ntTSL 5 BASIC13.77□□□□□ -0.21
CMC4P56277 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC13.77□□□□□ -0.21
CMC4P56277 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
CMC4P56277 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CMC4P56277 AL163051.1-201ENST00000569214 1512 ntBASIC13.77□□□□□ -0.21
CMC4P56277 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC13.77□□□□□ -0.21
CMC4P56277 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC13.77□□□□□ -0.21
CMC4P56277 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CMC4P56277 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CMC4P56277 AL023973.1-201ENST00000624619 620 ntBASIC13.77□□□□□ -0.21
CMC4P56277 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC13.77□□□□□ -0.21
CMC4P56277 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
CMC4P56277 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CMC4P56277 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CMC4P56277 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC13.76□□□□□ -0.21
CMC4P56277 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC13.76□□□□□ -0.21
CMC4P56277 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CMC4P56277 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC13.76□□□□□ -0.21
CMC4P56277 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CMC4P56277 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CMC4P56277 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CMC4P56277 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CMC4P56277 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CMC4P56277 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CMC4P56277 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CMC4P56277 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CMC4P56277 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC13.76□□□□□ -0.21
CMC4P56277 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CMC4P56277 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CMC4P56277 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
CMC4P56277 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CMC4P56277 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CMC4P56277 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC13.76□□□□□ -0.21
CMC4P56277 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CMC4P56277 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CMC4P56277 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CMC4P56277 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
CMC4P56277 AC104076.2-201ENST00000448912 469 ntBASIC13.76□□□□□ -0.21
CMC4P56277 SEC1P-202ENST00000473944 940 ntBASIC13.76□□□□□ -0.21
CMC4P56277 DUX4L26-201ENST00000489078 1255 ntBASIC13.76□□□□□ -0.21
CMC4P56277 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC13.76□□□□□ -0.21
CMC4P56277 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC13.76□□□□□ -0.21
CMC4P56277 GCSHP2-201ENST00000560971 527 ntBASIC13.76□□□□□ -0.21
CMC4P56277 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CMC4P56277 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CMC4P56277 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CMC4P56277 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CMC4P56277 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CMC4P56277 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC13.76□□□□□ -0.21
CMC4P56277 SNAI3-AS1-205ENST00000568633 2096 ntBASIC13.76□□□□□ -0.21
CMC4P56277 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CMC4P56277 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CMC4P56277 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CMC4P56277 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CMC4P56277 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CMC4P56277 ANO7L1-203ENST00000602586 1720 ntBASIC13.76□□□□□ -0.21
CMC4P56277 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CMC4P56277 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CMC4P56277 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CMC4P56277 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CMC4P56277 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CMC4P56277 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CMC4P56277 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC13.75□□□□□ -0.21
CMC4P56277 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms