Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.53■□□□□ 0.4
NR1H2P55055 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.53■□□□□ 0.4
NR1H2P55055 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NR1H2P55055 AC233263.1-201ENST00000578059 224 ntBASIC17.53■□□□□ 0.4
NR1H2P55055 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.53■□□□□ 0.4
NR1H2P55055 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
NR1H2P55055 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NR1H2P55055 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NR1H2P55055 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NR1H2P55055 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
NR1H2P55055 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
NR1H2P55055 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
NR1H2P55055 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
NR1H2P55055 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
NR1H2P55055 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.52■□□□□ 0.4
NR1H2P55055 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
NR1H2P55055 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NR1H2P55055 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
NR1H2P55055 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NR1H2P55055 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
NR1H2P55055 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.52■□□□□ 0.4
NR1H2P55055 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
NR1H2P55055 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NR1H2P55055 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NR1H2P55055 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.52■□□□□ 0.4
NR1H2P55055 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NR1H2P55055 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.52■□□□□ 0.4
NR1H2P55055 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NR1H2P55055 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.52■□□□□ 0.4
NR1H2P55055 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.52■□□□□ 0.4
NR1H2P55055 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
NR1H2P55055 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
NR1H2P55055 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
NR1H2P55055 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NR1H2P55055 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NR1H2P55055 AC011270.2-201ENST00000624293 2550 ntBASIC17.52■□□□□ 0.39
NR1H2P55055 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
NR1H2P55055 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NR1H2P55055 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NR1H2P55055 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NR1H2P55055 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NR1H2P55055 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
NR1H2P55055 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.52■□□□□ 0.39
NR1H2P55055 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
NR1H2P55055 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
NR1H2P55055 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.51■□□□□ 0.39
NR1H2P55055 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NR1H2P55055 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.51■□□□□ 0.39
NR1H2P55055 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.51■□□□□ 0.39
NR1H2P55055 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NR1H2P55055 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NR1H2P55055 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NR1H2P55055 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
NR1H2P55055 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NR1H2P55055 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NR1H2P55055 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
NR1H2P55055 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NR1H2P55055 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NR1H2P55055 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NR1H2P55055 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NR1H2P55055 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NR1H2P55055 AC239809.2-201ENST00000415381 517 ntBASIC17.51■□□□□ 0.39
NR1H2P55055 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NR1H2P55055 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.51■□□□□ 0.39
NR1H2P55055 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NR1H2P55055 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.51■□□□□ 0.39
NR1H2P55055 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
NR1H2P55055 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.51■□□□□ 0.39
NR1H2P55055 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.51■□□□□ 0.39
NR1H2P55055 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.51■□□□□ 0.39
NR1H2P55055 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.51■□□□□ 0.39
NR1H2P55055 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NR1H2P55055 AC046158.3-201ENST00000624947 2558 ntBASIC17.51■□□□□ 0.39
NR1H2P55055 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NR1H2P55055 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NR1H2P55055 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.51■□□□□ 0.39
NR1H2P55055 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
NR1H2P55055 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NR1H2P55055 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
NR1H2P55055 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
NR1H2P55055 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
NR1H2P55055 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NR1H2P55055 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NR1H2P55055 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NR1H2P55055 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.5■□□□□ 0.39
NR1H2P55055 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NR1H2P55055 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NR1H2P55055 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
NR1H2P55055 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
NR1H2P55055 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NR1H2P55055 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NR1H2P55055 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NR1H2P55055 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NR1H2P55055 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NR1H2P55055 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NR1H2P55055 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.5■□□□□ 0.39
NR1H2P55055 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NR1H2P55055 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.5■□□□□ 0.39
NR1H2P55055 MTDHP1-201ENST00000605323 784 ntBASIC17.5■□□□□ 0.39
NR1H2P55055 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms