Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.11■□□□□ 0.49
CLCNKAP51800 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLCNKAP51800 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CLCNKAP51800 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
CLCNKAP51800 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
CLCNKAP51800 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLCNKAP51800 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CLCNKAP51800 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CLCNKAP51800 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCNKAP51800 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCNKAP51800 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CLCNKAP51800 AC098818.2-201ENST00000564925 2320 ntBASIC18.11■□□□□ 0.49
CLCNKAP51800 AL391807.1-203ENST00000604392 2365 ntBASIC18.11■□□□□ 0.49
CLCNKAP51800 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCNKAP51800 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CLCNKAP51800 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCNKAP51800 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
CLCNKAP51800 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCNKAP51800 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CLCNKAP51800 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCNKAP51800 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.1■□□□□ 0.49
CLCNKAP51800 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CLCNKAP51800 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLCNKAP51800 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCNKAP51800 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCNKAP51800 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLCNKAP51800 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CLCNKAP51800 IER3-202ENST00000376377 1350 ntBASIC18.1■□□□□ 0.49
CLCNKAP51800 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCNKAP51800 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.1■□□□□ 0.49
CLCNKAP51800 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLCNKAP51800 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.1■□□□□ 0.49
CLCNKAP51800 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.1■□□□□ 0.49
CLCNKAP51800 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.1■□□□□ 0.49
CLCNKAP51800 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CLCNKAP51800 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCNKAP51800 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCNKAP51800 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCNKAP51800 AL499627.1-201ENST00000569373 2188 ntBASIC18.1■□□□□ 0.49
CLCNKAP51800 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCNKAP51800 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCNKAP51800 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CLCNKAP51800 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCNKAP51800 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CLCNKAP51800 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLCNKAP51800 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CLCNKAP51800 AC112777.1-201ENST00000540175 1423 ntBASIC18.09■□□□□ 0.49
CLCNKAP51800 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.09■□□□□ 0.49
CLCNKAP51800 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCNKAP51800 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLCNKAP51800 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCNKAP51800 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CLCNKAP51800 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCNKAP51800 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCNKAP51800 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCNKAP51800 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCNKAP51800 MIR662-201ENST00000384847 95 ntBASIC18.09■□□□□ 0.49
CLCNKAP51800 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCNKAP51800 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLCNKAP51800 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLCNKAP51800 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.09■□□□□ 0.49
CLCNKAP51800 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.09■□□□□ 0.49
CLCNKAP51800 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.09■□□□□ 0.49
CLCNKAP51800 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCNKAP51800 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.09■□□□□ 0.49
CLCNKAP51800 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLCNKAP51800 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLCNKAP51800 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.09■□□□□ 0.49
CLCNKAP51800 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCNKAP51800 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCNKAP51800 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.09■□□□□ 0.49
CLCNKAP51800 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCNKAP51800 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CLCNKAP51800 ANO7L1-203ENST00000602586 1720 ntBASIC18.09■□□□□ 0.49
CLCNKAP51800 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCNKAP51800 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLCNKAP51800 AC093525.10-201ENST00000625130 1569 ntBASIC18.08■□□□□ 0.49
CLCNKAP51800 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLCNKAP51800 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLCNKAP51800 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLCNKAP51800 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CLCNKAP51800 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLCNKAP51800 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLCNKAP51800 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLCNKAP51800 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
CLCNKAP51800 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CLCNKAP51800 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CLCNKAP51800 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLCNKAP51800 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLCNKAP51800 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CLCNKAP51800 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.08■□□□□ 0.48
CLCNKAP51800 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLCNKAP51800 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLCNKAP51800 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.08■□□□□ 0.48
CLCNKAP51800 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.08■□□□□ 0.48
CLCNKAP51800 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.08■□□□□ 0.48
CLCNKAP51800 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CLCNKAP51800 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.48
CLCNKAP51800 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLCNKAP51800 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms