Protein–RNA interactions for Protein: P48995

TRPC1, Short transient receptor potential channel 1, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPC1P48995 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRPC1P48995 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
TRPC1P48995 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRPC1P48995 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRPC1P48995 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TRPC1P48995 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRPC1P48995 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRPC1P48995 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TRPC1P48995 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TRPC1P48995 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
TRPC1P48995 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
TRPC1P48995 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.82■□□□□ 0.44
TRPC1P48995 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.82■□□□□ 0.44
TRPC1P48995 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRPC1P48995 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRPC1P48995 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRPC1P48995 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRPC1P48995 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.82■□□□□ 0.44
TRPC1P48995 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TRPC1P48995 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.82■□□□□ 0.44
TRPC1P48995 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRPC1P48995 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRPC1P48995 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.82■□□□□ 0.44
TRPC1P48995 AP002982.1-201ENST00000492365 877 ntBASIC17.82■□□□□ 0.44
TRPC1P48995 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRPC1P48995 Z85996.1-201ENST00000494644 937 ntBASIC17.82■□□□□ 0.44
TRPC1P48995 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.82■□□□□ 0.44
TRPC1P48995 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.82■□□□□ 0.44
TRPC1P48995 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.82■□□□□ 0.44
TRPC1P48995 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.82■□□□□ 0.44
TRPC1P48995 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRPC1P48995 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRPC1P48995 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRPC1P48995 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.82■□□□□ 0.44
TRPC1P48995 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRPC1P48995 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.82■□□□□ 0.44
TRPC1P48995 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
TRPC1P48995 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRPC1P48995 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRPC1P48995 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TRPC1P48995 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRPC1P48995 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRPC1P48995 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRPC1P48995 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRPC1P48995 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRPC1P48995 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRPC1P48995 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRPC1P48995 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRPC1P48995 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRPC1P48995 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRPC1P48995 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRPC1P48995 AC126763.1-201ENST00000552015 2118 ntBASIC17.81■□□□□ 0.44
TRPC1P48995 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRPC1P48995 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRPC1P48995 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.81■□□□□ 0.44
TRPC1P48995 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRPC1P48995 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.81■□□□□ 0.44
TRPC1P48995 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
TRPC1P48995 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.81■□□□□ 0.44
TRPC1P48995 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.81■□□□□ 0.44
TRPC1P48995 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRPC1P48995 KRT17P2-201ENST00000300992 1314 ntBASIC17.81■□□□□ 0.44
TRPC1P48995 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TRPC1P48995 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.81■□□□□ 0.44
TRPC1P48995 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TRPC1P48995 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.81■□□□□ 0.44
TRPC1P48995 FAM197Y1-201ENST00000421178 764 ntBASIC17.81■□□□□ 0.44
TRPC1P48995 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRPC1P48995 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.81■□□□□ 0.44
TRPC1P48995 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.81■□□□□ 0.44
TRPC1P48995 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.81■□□□□ 0.44
TRPC1P48995 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.81■□□□□ 0.44
TRPC1P48995 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.81■□□□□ 0.44
TRPC1P48995 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.81■□□□□ 0.44
TRPC1P48995 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.81■□□□□ 0.44
TRPC1P48995 AC068587.9-201ENST00000641814 219 ntBASIC17.81■□□□□ 0.44
TRPC1P48995 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRPC1P48995 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.81■□□□□ 0.44
TRPC1P48995 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRPC1P48995 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
TRPC1P48995 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
TRPC1P48995 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRPC1P48995 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.81■□□□□ 0.44
TRPC1P48995 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRPC1P48995 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRPC1P48995 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRPC1P48995 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRPC1P48995 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRPC1P48995 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRPC1P48995 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TRPC1P48995 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRPC1P48995 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.8■□□□□ 0.44
TRPC1P48995 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRPC1P48995 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRPC1P48995 AL353807.1-201ENST00000427475 662 ntBASIC17.8■□□□□ 0.44
TRPC1P48995 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRPC1P48995 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.8■□□□□ 0.44
TRPC1P48995 MIR4785-201ENST00000585005 73 ntBASIC17.8■□□□□ 0.44
TRPC1P48995 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
TRPC1P48995 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms