Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTNNA1P35221 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
CTNNA1P35221 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.54■□□□□ 0.72
CTNNA1P35221 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CTNNA1P35221 RARRES2P10-201ENST00000564312 460 ntBASIC19.54■□□□□ 0.72
CTNNA1P35221 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CTNNA1P35221 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.54■□□□□ 0.72
CTNNA1P35221 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTNNA1P35221 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTNNA1P35221 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CTNNA1P35221 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTNNA1P35221 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CTNNA1P35221 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.53■□□□□ 0.72
CTNNA1P35221 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTNNA1P35221 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTNNA1P35221 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.53■□□□□ 0.72
CTNNA1P35221 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.53■□□□□ 0.72
CTNNA1P35221 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CTNNA1P35221 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTNNA1P35221 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTNNA1P35221 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.53■□□□□ 0.72
CTNNA1P35221 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CTNNA1P35221 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTNNA1P35221 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
CTNNA1P35221 FAM207BP-201ENST00000447172 505 ntBASIC19.53■□□□□ 0.72
CTNNA1P35221 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CTNNA1P35221 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTNNA1P35221 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.53■□□□□ 0.72
CTNNA1P35221 RPPH1-201ENST00000516869 333 ntBASIC19.53■□□□□ 0.72
CTNNA1P35221 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.53■□□□□ 0.72
CTNNA1P35221 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.53■□□□□ 0.72
CTNNA1P35221 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.53■□□□□ 0.72
CTNNA1P35221 AC135776.1-201ENST00000319817 2481 ntBASIC19.53■□□□□ 0.72
CTNNA1P35221 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CTNNA1P35221 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CTNNA1P35221 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTNNA1P35221 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTNNA1P35221 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTNNA1P35221 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTNNA1P35221 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.52■□□□□ 0.72
CTNNA1P35221 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.52■□□□□ 0.72
CTNNA1P35221 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CTNNA1P35221 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTNNA1P35221 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.52■□□□□ 0.72
CTNNA1P35221 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.52■□□□□ 0.72
CTNNA1P35221 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.52■□□□□ 0.72
CTNNA1P35221 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.52■□□□□ 0.72
CTNNA1P35221 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTNNA1P35221 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTNNA1P35221 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTNNA1P35221 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.52■□□□□ 0.72
CTNNA1P35221 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTNNA1P35221 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CTNNA1P35221 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CTNNA1P35221 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CTNNA1P35221 B3GAT3P1-201ENST00000471720 806 ntBASIC19.52■□□□□ 0.72
CTNNA1P35221 AC011506.1-201ENST00000474329 610 ntBASIC19.52■□□□□ 0.72
CTNNA1P35221 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
CTNNA1P35221 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.52■□□□□ 0.72
CTNNA1P35221 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.52■□□□□ 0.72
CTNNA1P35221 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CTNNA1P35221 MIR4651-201ENST00000582622 73 ntBASIC19.52■□□□□ 0.72
CTNNA1P35221 AC073195.1-201ENST00000607241 877 ntBASIC19.52■□□□□ 0.72
CTNNA1P35221 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.52■□□□□ 0.72
CTNNA1P35221 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTNNA1P35221 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CTNNA1P35221 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.52■□□□□ 0.72
CTNNA1P35221 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.52■□□□□ 0.72
CTNNA1P35221 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
CTNNA1P35221 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
CTNNA1P35221 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CTNNA1P35221 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.52■□□□□ 0.71
CTNNA1P35221 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTNNA1P35221 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CTNNA1P35221 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTNNA1P35221 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.51■□□□□ 0.71
CTNNA1P35221 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CTNNA1P35221 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CTNNA1P35221 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CTNNA1P35221 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CTNNA1P35221 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CTNNA1P35221 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTNNA1P35221 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTNNA1P35221 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTNNA1P35221 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.51■□□□□ 0.71
CTNNA1P35221 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CTNNA1P35221 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CTNNA1P35221 KRT18P41-201ENST00000518924 1277 ntBASIC19.51■□□□□ 0.71
CTNNA1P35221 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.51■□□□□ 0.71
CTNNA1P35221 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.51■□□□□ 0.71
CTNNA1P35221 MIR6786-201ENST00000616843 113 ntBASIC19.51■□□□□ 0.71
CTNNA1P35221 AL109659.2-201ENST00000606809 1674 ntBASIC19.51■□□□□ 0.71
CTNNA1P35221 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.51■□□□□ 0.71
CTNNA1P35221 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTNNA1P35221 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTNNA1P35221 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTNNA1P35221 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTNNA1P35221 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTNNA1P35221 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTNNA1P35221 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms