Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHC1P29353 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHC1P29353 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SHC1P29353 NOC2LP2-201ENST00000407594 1944 ntBASIC16.94■□□□□ 0.3
SHC1P29353 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.94■□□□□ 0.3
SHC1P29353 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHC1P29353 KRT8P32-201ENST00000512863 1461 ntBASIC16.94■□□□□ 0.3
SHC1P29353 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SHC1P29353 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHC1P29353 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SHC1P29353 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.94■□□□□ 0.3
SHC1P29353 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHC1P29353 SLC25A3P1-201ENST00000443844 931 ntBASIC16.94■□□□□ 0.3
SHC1P29353 AC128688.1-201ENST00000487626 519 ntBASIC16.94■□□□□ 0.3
SHC1P29353 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SHC1P29353 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
SHC1P29353 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SHC1P29353 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.94■□□□□ 0.3
SHC1P29353 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHC1P29353 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHC1P29353 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SHC1P29353 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHC1P29353 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.94■□□□□ 0.3
SHC1P29353 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHC1P29353 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHC1P29353 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SHC1P29353 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SHC1P29353 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHC1P29353 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SHC1P29353 AC068880.1-201ENST00000507289 2297 ntBASIC16.94■□□□□ 0.3
SHC1P29353 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SHC1P29353 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
SHC1P29353 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.93■□□□□ 0.3
SHC1P29353 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SHC1P29353 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.93■□□□□ 0.3
SHC1P29353 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHC1P29353 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHC1P29353 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SHC1P29353 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHC1P29353 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHC1P29353 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.93■□□□□ 0.3
SHC1P29353 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHC1P29353 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.93■□□□□ 0.3
SHC1P29353 AC010203.1-204ENST00000548782 407 ntBASIC16.93■□□□□ 0.3
SHC1P29353 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.93■□□□□ 0.3
SHC1P29353 AC010653.2-201ENST00000623505 997 ntBASIC16.93■□□□□ 0.3
SHC1P29353 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.93■□□□□ 0.3
SHC1P29353 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SHC1P29353 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
SHC1P29353 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SHC1P29353 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SHC1P29353 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHC1P29353 KRT8P45-201ENST00000414328 1447 ntBASIC16.93■□□□□ 0.3
SHC1P29353 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.93■□□□□ 0.3
SHC1P29353 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
SHC1P29353 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.93■□□□□ 0.3
SHC1P29353 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHC1P29353 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.93■□□□□ 0.3
SHC1P29353 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SHC1P29353 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHC1P29353 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SHC1P29353 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.93■□□□□ 0.3
SHC1P29353 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SHC1P29353 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SHC1P29353 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHC1P29353 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.93■□□□□ 0.3
SHC1P29353 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHC1P29353 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SHC1P29353 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHC1P29353 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SHC1P29353 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.92■□□□□ 0.3
SHC1P29353 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SHC1P29353 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SHC1P29353 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.92■□□□□ 0.3
SHC1P29353 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.92■□□□□ 0.3
SHC1P29353 HCG11-201ENST00000411553 5696 ntBASIC16.92■□□□□ 0.3
SHC1P29353 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.92■□□□□ 0.3
SHC1P29353 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SHC1P29353 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.92■□□□□ 0.3
SHC1P29353 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHC1P29353 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHC1P29353 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SHC1P29353 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SHC1P29353 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SHC1P29353 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.92■□□□□ 0.3
SHC1P29353 AC083906.6-201ENST00000641366 219 ntBASIC16.92■□□□□ 0.3
SHC1P29353 AC068587.9-201ENST00000641814 219 ntBASIC16.92■□□□□ 0.3
SHC1P29353 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHC1P29353 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHC1P29353 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHC1P29353 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHC1P29353 AC008556.1-201ENST00000610908 2040 ntBASIC16.92■□□□□ 0.3
SHC1P29353 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.92■□□□□ 0.3
SHC1P29353 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHC1P29353 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.92■□□□□ 0.3
SHC1P29353 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHC1P29353 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
SHC1P29353 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHC1P29353 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHC1P29353 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms