Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CD40P25942 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC15.93■□□□□ 0.14
CD40P25942 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC15.93■□□□□ 0.14
CD40P25942 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CD40P25942 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CD40P25942 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CD40P25942 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CD40P25942 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.92■□□□□ 0.14
CD40P25942 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
CD40P25942 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD40P25942 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD40P25942 COBL-210ENST00000632460 1941 ntTSL 5 BASIC15.92■□□□□ 0.14
CD40P25942 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CD40P25942 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD40P25942 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CD40P25942 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC15.92■□□□□ 0.14
CD40P25942 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD40P25942 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CD40P25942 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD40P25942 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.92■□□□□ 0.14
CD40P25942 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD40P25942 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD40P25942 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD40P25942 TSPY22P-201ENST00000427496 604 ntBASIC15.92■□□□□ 0.14
CD40P25942 KRT18P48-201ENST00000434763 852 ntBASIC15.92■□□□□ 0.14
CD40P25942 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.92■□□□□ 0.14
CD40P25942 AP003733.1-201ENST00000491725 852 ntBASIC15.92■□□□□ 0.14
CD40P25942 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.92■□□□□ 0.14
CD40P25942 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.92■□□□□ 0.14
CD40P25942 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.92■□□□□ 0.14
CD40P25942 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD40P25942 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CD40P25942 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD40P25942 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CD40P25942 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD40P25942 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD40P25942 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.92■□□□□ 0.14
CD40P25942 AC112777.1-201ENST00000540175 1423 ntBASIC15.92■□□□□ 0.14
CD40P25942 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD40P25942 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD40P25942 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC15.92■□□□□ 0.14
CD40P25942 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
CD40P25942 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.92■□□□□ 0.14
CD40P25942 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD40P25942 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD40P25942 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD40P25942 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CD40P25942 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD40P25942 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CD40P25942 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC15.91■□□□□ 0.14
CD40P25942 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD40P25942 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
CD40P25942 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CD40P25942 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD40P25942 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD40P25942 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CD40P25942 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD40P25942 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CD40P25942 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CD40P25942 AC016734.2-201ENST00000624325 1377 ntBASIC15.91■□□□□ 0.14
CD40P25942 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC15.91■□□□□ 0.14
CD40P25942 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD40P25942 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD40P25942 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
CD40P25942 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD40P25942 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
CD40P25942 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.91■□□□□ 0.14
CD40P25942 RNF126P1-202ENST00000569893 925 ntBASIC15.91■□□□□ 0.14
CD40P25942 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.91■□□□□ 0.14
CD40P25942 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.91■□□□□ 0.14
CD40P25942 AC024563.2-201ENST00000603282 481 ntBASIC15.91■□□□□ 0.14
CD40P25942 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CD40P25942 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.91■□□□□ 0.14
CD40P25942 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD40P25942 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CD40P25942 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD40P25942 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CD40P25942 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.91■□□□□ 0.14
CD40P25942 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD40P25942 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CD40P25942 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CD40P25942 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.91■□□□□ 0.14
CD40P25942 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC15.91■□□□□ 0.14
CD40P25942 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CD40P25942 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.91■□□□□ 0.14
CD40P25942 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD40P25942 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD40P25942 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CD40P25942 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.9■□□□□ 0.14
CD40P25942 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CD40P25942 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC15.9■□□□□ 0.14
CD40P25942 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD40P25942 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD40P25942 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CD40P25942 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD40P25942 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.9■□□□□ 0.14
CD40P25942 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD40P25942 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.9■□□□□ 0.14
CD40P25942 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.9■□□□□ 0.14
CD40P25942 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms