Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 AC211429.1-201ENST00000415277 523 ntBASIC18.65■□□□□ 0.58
HLA-DPA1P20036 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 ECEL1P3-201ENST00000427961 737 ntBASIC18.65■□□□□ 0.58
HLA-DPA1P20036 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.65■□□□□ 0.58
HLA-DPA1P20036 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 SLC25A3P1-201ENST00000443844 931 ntBASIC18.65■□□□□ 0.58
HLA-DPA1P20036 AC009947.2-201ENST00000444014 672 ntBASIC18.65■□□□□ 0.58
HLA-DPA1P20036 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 AC012306.2-201ENST00000609350 630 ntBASIC18.65■□□□□ 0.58
HLA-DPA1P20036 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.65■□□□□ 0.58
HLA-DPA1P20036 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HLA-DPA1P20036 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.64■□□□□ 0.58
HLA-DPA1P20036 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HLA-DPA1P20036 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HLA-DPA1P20036 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.64■□□□□ 0.58
HLA-DPA1P20036 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DPA1P20036 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.64■□□□□ 0.57
HLA-DPA1P20036 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DPA1P20036 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
HLA-DPA1P20036 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DPA1P20036 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.64■□□□□ 0.57
HLA-DPA1P20036 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
HLA-DPA1P20036 AP000523.1-201ENST00000398242 1049 ntBASIC18.64■□□□□ 0.57
HLA-DPA1P20036 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DPA1P20036 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.64■□□□□ 0.57
HLA-DPA1P20036 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.64■□□□□ 0.57
HLA-DPA1P20036 LINC01023-201ENST00000606054 436 ntBASIC18.64■□□□□ 0.57
HLA-DPA1P20036 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.64■□□□□ 0.57
HLA-DPA1P20036 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DPA1P20036 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DPA1P20036 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DPA1P20036 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DPA1P20036 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DPA1P20036 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DPA1P20036 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HLA-DPA1P20036 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HLA-DPA1P20036 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DPA1P20036 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DPA1P20036 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DPA1P20036 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DPA1P20036 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DPA1P20036 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
HLA-DPA1P20036 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DPA1P20036 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
HLA-DPA1P20036 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DPA1P20036 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DPA1P20036 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DPA1P20036 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DPA1P20036 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DPA1P20036 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.63■□□□□ 0.57
HLA-DPA1P20036 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.63■□□□□ 0.57
HLA-DPA1P20036 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DPA1P20036 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DPA1P20036 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.63■□□□□ 0.57
HLA-DPA1P20036 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.63■□□□□ 0.57
HLA-DPA1P20036 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.63■□□□□ 0.57
HLA-DPA1P20036 AC104390.1-201ENST00000555663 520 ntBASIC18.63■□□□□ 0.57
HLA-DPA1P20036 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.63■□□□□ 0.57
HLA-DPA1P20036 AC009065.1-201ENST00000564055 1225 ntBASIC18.63■□□□□ 0.57
HLA-DPA1P20036 MIR3180-4-201ENST00000582223 153 ntBASIC18.63■□□□□ 0.57
HLA-DPA1P20036 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DPA1P20036 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms