Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HLA-DOBP13765 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HLA-DOBP13765 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.57■□□□□ 0.24
HLA-DOBP13765 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DOBP13765 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.57■□□□□ 0.24
HLA-DOBP13765 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.57■□□□□ 0.24
HLA-DOBP13765 AC087499.1-201ENST00000418141 1075 ntBASIC16.57■□□□□ 0.24
HLA-DOBP13765 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.57■□□□□ 0.24
HLA-DOBP13765 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DOBP13765 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.57■□□□□ 0.24
HLA-DOBP13765 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.57■□□□□ 0.24
HLA-DOBP13765 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
HLA-DOBP13765 FAM87A-204ENST00000613235 858 ntBASIC16.57■□□□□ 0.24
HLA-DOBP13765 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.57■□□□□ 0.24
HLA-DOBP13765 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DOBP13765 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
HLA-DOBP13765 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.57■□□□□ 0.24
HLA-DOBP13765 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HLA-DOBP13765 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DOBP13765 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.56■□□□□ 0.24
HLA-DOBP13765 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DOBP13765 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.56■□□□□ 0.24
HLA-DOBP13765 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.56■□□□□ 0.24
HLA-DOBP13765 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.56■□□□□ 0.24
HLA-DOBP13765 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DOBP13765 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DOBP13765 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
HLA-DOBP13765 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DOBP13765 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DOBP13765 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.56■□□□□ 0.24
HLA-DOBP13765 LINC01568-207ENST00000641790 1380 ntBASIC16.56■□□□□ 0.24
HLA-DOBP13765 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
HLA-DOBP13765 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DOBP13765 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DOBP13765 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DOBP13765 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DOBP13765 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DOBP13765 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DOBP13765 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
HLA-DOBP13765 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.56■□□□□ 0.24
HLA-DOBP13765 AC128688.1-201ENST00000487626 519 ntBASIC16.56■□□□□ 0.24
HLA-DOBP13765 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
HLA-DOBP13765 WWOX-216ENST00000569818 525 ntBASIC16.56■□□□□ 0.24
HLA-DOBP13765 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.56■□□□□ 0.24
HLA-DOBP13765 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DOBP13765 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DOBP13765 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HLA-DOBP13765 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DOBP13765 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DOBP13765 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.56■□□□□ 0.24
HLA-DOBP13765 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DOBP13765 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DOBP13765 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DOBP13765 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
HLA-DOBP13765 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DOBP13765 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.56■□□□□ 0.24
HLA-DOBP13765 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.56■□□□□ 0.24
HLA-DOBP13765 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.56■□□□□ 0.24
HLA-DOBP13765 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
HLA-DOBP13765 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DOBP13765 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DOBP13765 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DOBP13765 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DOBP13765 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DOBP13765 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DOBP13765 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.55■□□□□ 0.24
HLA-DOBP13765 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DOBP13765 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.55■□□□□ 0.24
HLA-DOBP13765 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.55■□□□□ 0.24
HLA-DOBP13765 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DOBP13765 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DOBP13765 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
HLA-DOBP13765 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
HLA-DOBP13765 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.55■□□□□ 0.24
HLA-DOBP13765 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.55■□□□□ 0.24
HLA-DOBP13765 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.55■□□□□ 0.24
HLA-DOBP13765 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.55■□□□□ 0.24
HLA-DOBP13765 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.55■□□□□ 0.24
HLA-DOBP13765 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.55■□□□□ 0.24
HLA-DOBP13765 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DOBP13765 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DOBP13765 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
HLA-DOBP13765 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DOBP13765 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DOBP13765 AC090340.1-201ENST00000620778 4980 ntBASIC16.55■□□□□ 0.24
HLA-DOBP13765 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DOBP13765 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
HLA-DOBP13765 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DOBP13765 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DOBP13765 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HLA-DOBP13765 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DOBP13765 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DOBP13765 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DOBP13765 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.55■□□□□ 0.24
HLA-DOBP13765 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
HLA-DOBP13765 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DOBP13765 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HLA-DOBP13765 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
HLA-DOBP13765 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DOBP13765 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms