Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC13.77□□□□□ -0.21
SMIM17P0DL12 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM17P0DL12 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM17P0DL12 NME6-213ENST00000451657 871 ntTSL 2 BASIC13.77□□□□□ -0.21
SMIM17P0DL12 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SMIM17P0DL12 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC13.77□□□□□ -0.21
SMIM17P0DL12 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC13.77□□□□□ -0.21
SMIM17P0DL12 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC13.77□□□□□ -0.21
SMIM17P0DL12 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC13.77□□□□□ -0.21
SMIM17P0DL12 ABALON-201ENST00000629058 1903 ntBASIC13.77□□□□□ -0.21
SMIM17P0DL12 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM17P0DL12 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SMIM17P0DL12 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC13.77□□□□□ -0.21
SMIM17P0DL12 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.21
SMIM17P0DL12 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM17P0DL12 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM17P0DL12 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.76□□□□□ -0.21
SMIM17P0DL12 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC13.76□□□□□ -0.21
SMIM17P0DL12 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM17P0DL12 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SMIM17P0DL12 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM17P0DL12 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM17P0DL12 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SMIM17P0DL12 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC13.76□□□□□ -0.21
SMIM17P0DL12 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM17P0DL12 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM17P0DL12 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM17P0DL12 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
SMIM17P0DL12 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
SMIM17P0DL12 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
SMIM17P0DL12 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM17P0DL12 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM17P0DL12 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SMIM17P0DL12 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
SMIM17P0DL12 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SMIM17P0DL12 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM17P0DL12 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SMIM17P0DL12 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM17P0DL12 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM17P0DL12 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC13.76□□□□□ -0.21
SMIM17P0DL12 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC13.76□□□□□ -0.21
SMIM17P0DL12 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC13.76□□□□□ -0.21
SMIM17P0DL12 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC13.76□□□□□ -0.21
SMIM17P0DL12 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC13.76□□□□□ -0.21
SMIM17P0DL12 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC13.76□□□□□ -0.21
SMIM17P0DL12 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC13.76□□□□□ -0.21
SMIM17P0DL12 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM17P0DL12 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
SMIM17P0DL12 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.76□□□□□ -0.21
SMIM17P0DL12 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
SMIM17P0DL12 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SMIM17P0DL12 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM17P0DL12 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM17P0DL12 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM17P0DL12 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC13.76□□□□□ -0.21
SMIM17P0DL12 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM17P0DL12 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM17P0DL12 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM17P0DL12 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM17P0DL12 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM17P0DL12 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM17P0DL12 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM17P0DL12 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM17P0DL12 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SMIM17P0DL12 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
SMIM17P0DL12 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM17P0DL12 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SMIM17P0DL12 AC124283.5-201ENST00000624661 1809 ntBASIC13.76□□□□□ -0.21
SMIM17P0DL12 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
SMIM17P0DL12 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC13.76□□□□□ -0.21
SMIM17P0DL12 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC13.75□□□□□ -0.21
SMIM17P0DL12 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SMIM17P0DL12 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SMIM17P0DL12 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SMIM17P0DL12 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SMIM17P0DL12 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SMIM17P0DL12 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC13.75□□□□□ -0.21
SMIM17P0DL12 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SMIM17P0DL12 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SMIM17P0DL12 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SMIM17P0DL12 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SMIM17P0DL12 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SMIM17P0DL12 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SMIM17P0DL12 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC13.75□□□□□ -0.21
SMIM17P0DL12 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SMIM17P0DL12 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
SMIM17P0DL12 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SMIM17P0DL12 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SMIM17P0DL12 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
SMIM17P0DL12 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SMIM17P0DL12 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
SMIM17P0DL12 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC13.75□□□□□ -0.21
SMIM17P0DL12 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SMIM17P0DL12 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SMIM17P0DL12 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SMIM17P0DL12 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
SMIM17P0DL12 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC13.75□□□□□ -0.21
SMIM17P0DL12 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC13.75□□□□□ -0.21
SMIM17P0DL12 ABHD17AP6-201ENST00000458502 1044 ntBASIC13.75□□□□□ -0.21
SMIM17P0DL12 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms