Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CNOT4O95628 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNOT4O95628 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.43■□□□□ 0.22
CNOT4O95628 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNOT4O95628 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNOT4O95628 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.43■□□□□ 0.22
CNOT4O95628 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.43■□□□□ 0.22
CNOT4O95628 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNOT4O95628 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNOT4O95628 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CNOT4O95628 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CNOT4O95628 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.43■□□□□ 0.22
CNOT4O95628 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNOT4O95628 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CNOT4O95628 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNOT4O95628 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.43■□□□□ 0.22
CNOT4O95628 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CNOT4O95628 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.43■□□□□ 0.22
CNOT4O95628 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT4O95628 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT4O95628 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT4O95628 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.42■□□□□ 0.22
CNOT4O95628 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT4O95628 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT4O95628 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CNOT4O95628 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CNOT4O95628 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT4O95628 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT4O95628 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT4O95628 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.42■□□□□ 0.22
CNOT4O95628 AL031133.1-201ENST00000406807 723 ntBASIC16.42■□□□□ 0.22
CNOT4O95628 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.42■□□□□ 0.22
CNOT4O95628 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT4O95628 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.42■□□□□ 0.22
CNOT4O95628 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CNOT4O95628 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT4O95628 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.42■□□□□ 0.22
CNOT4O95628 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT4O95628 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CNOT4O95628 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.42■□□□□ 0.22
CNOT4O95628 GCSHP2-201ENST00000560971 527 ntBASIC16.42■□□□□ 0.22
CNOT4O95628 AC009065.1-201ENST00000564055 1225 ntBASIC16.42■□□□□ 0.22
CNOT4O95628 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.42■□□□□ 0.22
CNOT4O95628 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.42■□□□□ 0.22
CNOT4O95628 MYC-208ENST00000641036 567 ntBASIC16.42■□□□□ 0.22
CNOT4O95628 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT4O95628 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CNOT4O95628 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.42■□□□□ 0.22
CNOT4O95628 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT4O95628 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT4O95628 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT4O95628 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.42■□□□□ 0.22
CNOT4O95628 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CNOT4O95628 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CNOT4O95628 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT4O95628 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT4O95628 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CNOT4O95628 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT4O95628 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT4O95628 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT4O95628 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT4O95628 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.41■□□□□ 0.22
CNOT4O95628 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT4O95628 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CNOT4O95628 AP000593.1-201ENST00000393668 712 ntBASIC16.41■□□□□ 0.22
CNOT4O95628 AC104390.1-201ENST00000555663 520 ntBASIC16.41■□□□□ 0.22
CNOT4O95628 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.41■□□□□ 0.22
CNOT4O95628 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CNOT4O95628 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.41■□□□□ 0.22
CNOT4O95628 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.41■□□□□ 0.22
CNOT4O95628 AP000550.4-202ENST00000639755 178 ntBASIC16.41■□□□□ 0.22
CNOT4O95628 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT4O95628 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.41■□□□□ 0.22
CNOT4O95628 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT4O95628 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT4O95628 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT4O95628 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT4O95628 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.41■□□□□ 0.22
CNOT4O95628 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT4O95628 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.41■□□□□ 0.22
CNOT4O95628 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT4O95628 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CNOT4O95628 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT4O95628 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.4■□□□□ 0.22
CNOT4O95628 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT4O95628 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT4O95628 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT4O95628 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT4O95628 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT4O95628 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CNOT4O95628 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT4O95628 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT4O95628 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT4O95628 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT4O95628 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT4O95628 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT4O95628 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT4O95628 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.4■□□□□ 0.22
CNOT4O95628 KRT18P23-201ENST00000435622 1283 ntBASIC16.4■□□□□ 0.22
CNOT4O95628 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms