Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SNX4O95219 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.37■□□□□ 0.37
SNX4O95219 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNX4O95219 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNX4O95219 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SNX4O95219 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.37■□□□□ 0.37
SNX4O95219 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.37■□□□□ 0.37
SNX4O95219 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.37■□□□□ 0.37
SNX4O95219 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.37■□□□□ 0.37
SNX4O95219 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.37■□□□□ 0.37
SNX4O95219 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SNX4O95219 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SNX4O95219 AC092338.2-201ENST00000568827 1415 ntBASIC17.37■□□□□ 0.37
SNX4O95219 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
SNX4O95219 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNX4O95219 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.37■□□□□ 0.37
SNX4O95219 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNX4O95219 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
SNX4O95219 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SNX4O95219 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX4O95219 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.36■□□□□ 0.37
SNX4O95219 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.36■□□□□ 0.37
SNX4O95219 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNX4O95219 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX4O95219 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX4O95219 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX4O95219 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX4O95219 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX4O95219 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.36■□□□□ 0.37
SNX4O95219 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX4O95219 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX4O95219 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SNX4O95219 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNX4O95219 AC113347.1-201ENST00000413321 391 ntBASIC17.36■□□□□ 0.37
SNX4O95219 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
SNX4O95219 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SNX4O95219 SLC25A3P1-201ENST00000443844 931 ntBASIC17.36■□□□□ 0.37
SNX4O95219 ECEL1P2-202ENST00000465689 757 ntBASIC17.36■□□□□ 0.37
SNX4O95219 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.36■□□□□ 0.37
SNX4O95219 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.36■□□□□ 0.37
SNX4O95219 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.36■□□□□ 0.37
SNX4O95219 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.36■□□□□ 0.37
SNX4O95219 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX4O95219 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SNX4O95219 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SNX4O95219 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX4O95219 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SNX4O95219 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.36■□□□□ 0.37
SNX4O95219 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SNX4O95219 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.36■□□□□ 0.37
SNX4O95219 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.36■□□□□ 0.37
SNX4O95219 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
SNX4O95219 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX4O95219 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SNX4O95219 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX4O95219 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SNX4O95219 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX4O95219 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.36■□□□□ 0.37
SNX4O95219 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNX4O95219 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNX4O95219 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNX4O95219 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNX4O95219 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.35■□□□□ 0.37
SNX4O95219 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNX4O95219 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNX4O95219 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNX4O95219 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SNX4O95219 PRORSD1P-202ENST00000563365 2154 ntBASIC17.35■□□□□ 0.37
SNX4O95219 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNX4O95219 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNX4O95219 HMGA1P5-201ENST00000412453 271 ntBASIC17.35■□□□□ 0.37
SNX4O95219 AC007663.1-201ENST00000438948 1240 ntBASIC17.35■□□□□ 0.37
SNX4O95219 FAM210CP-201ENST00000445714 574 ntBASIC17.35■□□□□ 0.37
SNX4O95219 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNX4O95219 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SNX4O95219 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNX4O95219 AL512604.3-201ENST00000569583 964 ntBASIC17.35■□□□□ 0.37
SNX4O95219 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNX4O95219 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNX4O95219 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SNX4O95219 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
SNX4O95219 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNX4O95219 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.35■□□□□ 0.37
SNX4O95219 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.35■□□□□ 0.37
SNX4O95219 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNX4O95219 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SNX4O95219 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.35■□□□□ 0.37
SNX4O95219 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SNX4O95219 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
SNX4O95219 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNX4O95219 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNX4O95219 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SNX4O95219 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX4O95219 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX4O95219 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX4O95219 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX4O95219 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX4O95219 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
SNX4O95219 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX4O95219 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms