Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.46■□□□□ 0.87
CLSTN1O94985 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLSTN1O94985 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLSTN1O94985 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.46■□□□□ 0.87
CLSTN1O94985 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CLSTN1O94985 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CLSTN1O94985 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.46■□□□□ 0.87
CLSTN1O94985 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLSTN1O94985 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
CLSTN1O94985 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLSTN1O94985 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.46■□□□□ 0.87
CLSTN1O94985 CKBP1-201ENST00000565489 1086 ntBASIC20.46■□□□□ 0.87
CLSTN1O94985 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLSTN1O94985 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLSTN1O94985 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLSTN1O94985 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLSTN1O94985 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.46■□□□□ 0.87
CLSTN1O94985 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLSTN1O94985 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLSTN1O94985 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLSTN1O94985 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
CLSTN1O94985 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
CLSTN1O94985 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLSTN1O94985 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLSTN1O94985 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC20.45■□□□□ 0.86
CLSTN1O94985 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLSTN1O94985 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.45■□□□□ 0.86
CLSTN1O94985 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLSTN1O94985 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLSTN1O94985 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLSTN1O94985 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CLSTN1O94985 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLSTN1O94985 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLSTN1O94985 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLSTN1O94985 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLSTN1O94985 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLSTN1O94985 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLSTN1O94985 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CLSTN1O94985 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.45■□□□□ 0.86
CLSTN1O94985 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.45■□□□□ 0.86
CLSTN1O94985 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.45■□□□□ 0.86
CLSTN1O94985 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.45■□□□□ 0.86
CLSTN1O94985 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.45■□□□□ 0.86
CLSTN1O94985 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CLSTN1O94985 C2orf69P3-201ENST00000565542 1120 ntBASIC20.45■□□□□ 0.86
CLSTN1O94985 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.45■□□□□ 0.86
CLSTN1O94985 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.45■□□□□ 0.86
CLSTN1O94985 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CLSTN1O94985 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.45■□□□□ 0.86
CLSTN1O94985 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.45■□□□□ 0.86
CLSTN1O94985 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CLSTN1O94985 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLSTN1O94985 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
CLSTN1O94985 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLSTN1O94985 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLSTN1O94985 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLSTN1O94985 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLSTN1O94985 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
CLSTN1O94985 AC020916.1-201ENST00000587762 1774 ntBASIC20.44■□□□□ 0.86
CLSTN1O94985 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLSTN1O94985 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
CLSTN1O94985 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLSTN1O94985 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLSTN1O94985 MMP23A-201ENST00000234610 1017 ntBASIC20.44■□□□□ 0.86
CLSTN1O94985 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLSTN1O94985 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLSTN1O94985 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
CLSTN1O94985 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CLSTN1O94985 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.44■□□□□ 0.86
CLSTN1O94985 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLSTN1O94985 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLSTN1O94985 BX088651.1-201ENST00000540551 451 ntBASIC20.44■□□□□ 0.86
CLSTN1O94985 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.44■□□□□ 0.86
CLSTN1O94985 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.44■□□□□ 0.86
CLSTN1O94985 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.44■□□□□ 0.86
CLSTN1O94985 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.44■□□□□ 0.86
CLSTN1O94985 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.44■□□□□ 0.86
CLSTN1O94985 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLSTN1O94985 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLSTN1O94985 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLSTN1O94985 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLSTN1O94985 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLSTN1O94985 FEM1AP3-201ENST00000403722 1741 ntBASIC20.44■□□□□ 0.86
CLSTN1O94985 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLSTN1O94985 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLSTN1O94985 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.44■□□□□ 0.86
CLSTN1O94985 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLSTN1O94985 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.44■□□□□ 0.86
CLSTN1O94985 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CLSTN1O94985 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLSTN1O94985 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLSTN1O94985 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.43■□□□□ 0.86
CLSTN1O94985 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.43■□□□□ 0.86
CLSTN1O94985 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.43■□□□□ 0.86
CLSTN1O94985 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLSTN1O94985 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CLSTN1O94985 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.43■□□□□ 0.86
CLSTN1O94985 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLSTN1O94985 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLSTN1O94985 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms