Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
BEST1O76090 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
BEST1O76090 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BEST1O76090 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.37■□□□□ 0.69
BEST1O76090 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
BEST1O76090 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BEST1O76090 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BEST1O76090 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.37■□□□□ 0.69
BEST1O76090 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
BEST1O76090 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
BEST1O76090 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BEST1O76090 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.37■□□□□ 0.69
BEST1O76090 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.37■□□□□ 0.69
BEST1O76090 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.37■□□□□ 0.69
BEST1O76090 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.37■□□□□ 0.69
BEST1O76090 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.37■□□□□ 0.69
BEST1O76090 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
BEST1O76090 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.37■□□□□ 0.69
BEST1O76090 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
BEST1O76090 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BEST1O76090 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
BEST1O76090 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BEST1O76090 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.37■□□□□ 0.69
BEST1O76090 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BEST1O76090 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
BEST1O76090 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
BEST1O76090 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.37■□□□□ 0.69
BEST1O76090 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BEST1O76090 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BEST1O76090 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BEST1O76090 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BEST1O76090 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.36■□□□□ 0.69
BEST1O76090 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BEST1O76090 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BEST1O76090 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BEST1O76090 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BEST1O76090 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BEST1O76090 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.36■□□□□ 0.69
BEST1O76090 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.36■□□□□ 0.69
BEST1O76090 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.36■□□□□ 0.69
BEST1O76090 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.36■□□□□ 0.69
BEST1O76090 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.36■□□□□ 0.69
BEST1O76090 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.36■□□□□ 0.69
BEST1O76090 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BEST1O76090 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BEST1O76090 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BEST1O76090 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BEST1O76090 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
BEST1O76090 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BEST1O76090 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BEST1O76090 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BEST1O76090 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BEST1O76090 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.35■□□□□ 0.69
BEST1O76090 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.35■□□□□ 0.69
BEST1O76090 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.35■□□□□ 0.69
BEST1O76090 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BEST1O76090 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.35■□□□□ 0.69
BEST1O76090 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BEST1O76090 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BEST1O76090 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.35■□□□□ 0.69
BEST1O76090 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.35■□□□□ 0.69
BEST1O76090 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BEST1O76090 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
BEST1O76090 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
BEST1O76090 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
BEST1O76090 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.35■□□□□ 0.69
BEST1O76090 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
BEST1O76090 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.35■□□□□ 0.69
BEST1O76090 AC009065.1-201ENST00000564055 1225 ntBASIC19.35■□□□□ 0.69
BEST1O76090 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.35■□□□□ 0.69
BEST1O76090 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.35■□□□□ 0.69
BEST1O76090 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BEST1O76090 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.35■□□□□ 0.69
BEST1O76090 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BEST1O76090 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.35■□□□□ 0.69
BEST1O76090 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
BEST1O76090 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BEST1O76090 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
BEST1O76090 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.34■□□□□ 0.69
BEST1O76090 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
BEST1O76090 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BEST1O76090 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BEST1O76090 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.34■□□□□ 0.69
BEST1O76090 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BEST1O76090 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BEST1O76090 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BEST1O76090 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.34■□□□□ 0.69
BEST1O76090 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BEST1O76090 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BEST1O76090 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BEST1O76090 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.34■□□□□ 0.69
BEST1O76090 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.34■□□□□ 0.69
BEST1O76090 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
BEST1O76090 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.34■□□□□ 0.69
BEST1O76090 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
BEST1O76090 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.34■□□□□ 0.69
BEST1O76090 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BEST1O76090 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.34■□□□□ 0.69
BEST1O76090 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.34■□□□□ 0.69
BEST1O76090 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms