Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.98■□□□□ 0.31
IDH3BO43837 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
IDH3BO43837 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
IDH3BO43837 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.98■□□□□ 0.31
IDH3BO43837 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.98■□□□□ 0.31
IDH3BO43837 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.98■□□□□ 0.31
IDH3BO43837 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.98■□□□□ 0.31
IDH3BO43837 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.98■□□□□ 0.31
IDH3BO43837 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IDH3BO43837 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IDH3BO43837 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
IDH3BO43837 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
IDH3BO43837 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IDH3BO43837 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IDH3BO43837 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
IDH3BO43837 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IDH3BO43837 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.97■□□□□ 0.31
IDH3BO43837 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IDH3BO43837 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
IDH3BO43837 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
IDH3BO43837 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.97■□□□□ 0.31
IDH3BO43837 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.97■□□□□ 0.31
IDH3BO43837 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IDH3BO43837 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
IDH3BO43837 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.97■□□□□ 0.31
IDH3BO43837 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.97■□□□□ 0.31
IDH3BO43837 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
IDH3BO43837 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.97■□□□□ 0.31
IDH3BO43837 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.97■□□□□ 0.31
IDH3BO43837 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
IDH3BO43837 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.97■□□□□ 0.31
IDH3BO43837 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
IDH3BO43837 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
IDH3BO43837 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
IDH3BO43837 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IDH3BO43837 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.97■□□□□ 0.31
IDH3BO43837 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
IDH3BO43837 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IDH3BO43837 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.97■□□□□ 0.31
IDH3BO43837 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IDH3BO43837 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.97■□□□□ 0.31
IDH3BO43837 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.97■□□□□ 0.31
IDH3BO43837 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IDH3BO43837 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IDH3BO43837 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
IDH3BO43837 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IDH3BO43837 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
IDH3BO43837 AC073592.3-201ENST00000625118 1834 ntBASIC16.96■□□□□ 0.31
IDH3BO43837 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.96■□□□□ 0.31
IDH3BO43837 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
IDH3BO43837 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
IDH3BO43837 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IDH3BO43837 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IDH3BO43837 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IDH3BO43837 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IDH3BO43837 POU5F1P3-201ENST00000428824 1078 ntBASIC16.96■□□□□ 0.31
IDH3BO43837 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
IDH3BO43837 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.96■□□□□ 0.31
IDH3BO43837 Z85996.1-201ENST00000494644 937 ntBASIC16.96■□□□□ 0.31
IDH3BO43837 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.96■□□□□ 0.31
IDH3BO43837 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
IDH3BO43837 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IDH3BO43837 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.96■□□□□ 0.31
IDH3BO43837 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IDH3BO43837 AL445675.2-201ENST00000620291 557 ntBASIC16.96■□□□□ 0.31
IDH3BO43837 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.96■□□□□ 0.31
IDH3BO43837 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
IDH3BO43837 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.96■□□□□ 0.31
IDH3BO43837 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IDH3BO43837 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IDH3BO43837 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
IDH3BO43837 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
IDH3BO43837 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
IDH3BO43837 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.96■□□□□ 0.31
IDH3BO43837 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
IDH3BO43837 AC008894.3-201ENST00000624324 3103 ntBASIC16.96■□□□□ 0.31
IDH3BO43837 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
IDH3BO43837 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
IDH3BO43837 AL391005.1-201ENST00000623953 2435 ntBASIC16.96■□□□□ 0.3
IDH3BO43837 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.96■□□□□ 0.3
IDH3BO43837 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
IDH3BO43837 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
IDH3BO43837 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
IDH3BO43837 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.96■□□□□ 0.3
IDH3BO43837 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
IDH3BO43837 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.3
IDH3BO43837 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.96■□□□□ 0.3
IDH3BO43837 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
IDH3BO43837 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IDH3BO43837 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
IDH3BO43837 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IDH3BO43837 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
IDH3BO43837 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IDH3BO43837 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
IDH3BO43837 HEIH-201ENST00000623091 1652 ntBASIC16.95■□□□□ 0.3
IDH3BO43837 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
IDH3BO43837 RCC2P6-201ENST00000526625 1557 ntBASIC16.95■□□□□ 0.3
IDH3BO43837 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.95■□□□□ 0.3
IDH3BO43837 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.95■□□□□ 0.3
IDH3BO43837 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms