Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP2AO43633 HBZP1-201ENST00000354915 429 ntBASIC20.78■□□□□ 0.92
CHMP2AO43633 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP2AO43633 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.78■□□□□ 0.92
CHMP2AO43633 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP2AO43633 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP2AO43633 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHMP2AO43633 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP2AO43633 AL031598.1-201ENST00000561511 1773 ntBASIC20.77■□□□□ 0.92
CHMP2AO43633 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CHMP2AO43633 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.77■□□□□ 0.92
CHMP2AO43633 AC093525.10-201ENST00000625130 1569 ntBASIC20.77■□□□□ 0.92
CHMP2AO43633 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
CHMP2AO43633 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CHMP2AO43633 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP2AO43633 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP2AO43633 TNXA-203ENST00000507684 2038 ntBASIC20.77■□□□□ 0.92
CHMP2AO43633 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP2AO43633 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP2AO43633 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP2AO43633 SPDYE13P-201ENST00000445314 798 ntBASIC20.77■□□□□ 0.92
CHMP2AO43633 KRT18P41-201ENST00000518924 1277 ntBASIC20.77■□□□□ 0.92
CHMP2AO43633 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.77■□□□□ 0.92
CHMP2AO43633 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.77■□□□□ 0.92
CHMP2AO43633 ZNF444P1-201ENST00000559497 298 ntBASIC20.77■□□□□ 0.92
CHMP2AO43633 AL121956.5-201ENST00000625261 221 ntBASIC20.77■□□□□ 0.92
CHMP2AO43633 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP2AO43633 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP2AO43633 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP2AO43633 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP2AO43633 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP2AO43633 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMP2AO43633 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.77■□□□□ 0.92
CHMP2AO43633 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
CHMP2AO43633 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.91
CHMP2AO43633 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
CHMP2AO43633 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
CHMP2AO43633 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CHMP2AO43633 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
CHMP2AO43633 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.77■□□□□ 0.91
CHMP2AO43633 AC093503.3-201ENST00000624917 2352 ntBASIC20.77■□□□□ 0.91
CHMP2AO43633 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CHMP2AO43633 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP2AO43633 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.76■□□□□ 0.91
CHMP2AO43633 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CHMP2AO43633 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP2AO43633 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CHMP2AO43633 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP2AO43633 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CHMP2AO43633 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP2AO43633 FAM86EP-206ENST00000510506 987 ntBASIC20.76■□□□□ 0.91
CHMP2AO43633 AL136038.4-201ENST00000603606 1261 ntBASIC20.76■□□□□ 0.91
CHMP2AO43633 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.76■□□□□ 0.91
CHMP2AO43633 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CHMP2AO43633 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP2AO43633 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP2AO43633 MYLKP1-201ENST00000509077 1580 ntBASIC20.76■□□□□ 0.91
CHMP2AO43633 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMP2AO43633 AL391807.1-203ENST00000604392 2365 ntBASIC20.75■□□□□ 0.91
CHMP2AO43633 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP2AO43633 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP2AO43633 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP2AO43633 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP2AO43633 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP2AO43633 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP2AO43633 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP2AO43633 AP000593.1-201ENST00000393668 712 ntBASIC20.75■□□□□ 0.91
CHMP2AO43633 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.75■□□□□ 0.91
CHMP2AO43633 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP2AO43633 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP2AO43633 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.75■□□□□ 0.91
CHMP2AO43633 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.75■□□□□ 0.91
CHMP2AO43633 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.75■□□□□ 0.91
CHMP2AO43633 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CHMP2AO43633 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP2AO43633 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CHMP2AO43633 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP2AO43633 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.75■□□□□ 0.91
CHMP2AO43633 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP2AO43633 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP2AO43633 AC005332.1-201ENST00000577698 1310 ntBASIC20.75■□□□□ 0.91
CHMP2AO43633 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP2AO43633 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP2AO43633 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP2AO43633 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP2AO43633 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMP2AO43633 AC004408.2-201ENST00000623613 2777 ntBASIC20.74■□□□□ 0.91
CHMP2AO43633 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHMP2AO43633 AL163051.1-201ENST00000569214 1512 ntBASIC20.74■□□□□ 0.91
CHMP2AO43633 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHMP2AO43633 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.74■□□□□ 0.91
CHMP2AO43633 AC126763.1-201ENST00000552015 2118 ntBASIC20.74■□□□□ 0.91
CHMP2AO43633 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHMP2AO43633 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHMP2AO43633 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHMP2AO43633 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHMP2AO43633 PCED1CP-201ENST00000419887 785 ntBASIC20.74■□□□□ 0.91
CHMP2AO43633 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.74■□□□□ 0.91
CHMP2AO43633 AC112777.1-201ENST00000540175 1423 ntBASIC20.74■□□□□ 0.91
CHMP2AO43633 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms