Protein–RNA interactions for Protein: O43464

HTRA2, Serine protease HTRA2, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA2O43464 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HTRA2O43464 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.66■□□□□ 0.58
HTRA2O43464 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HTRA2O43464 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HTRA2O43464 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTRA2O43464 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.65■□□□□ 0.58
HTRA2O43464 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.65■□□□□ 0.58
HTRA2O43464 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.65■□□□□ 0.58
HTRA2O43464 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTRA2O43464 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTRA2O43464 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTRA2O43464 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTRA2O43464 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTRA2O43464 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
HTRA2O43464 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HTRA2O43464 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HTRA2O43464 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
HTRA2O43464 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTRA2O43464 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTRA2O43464 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTRA2O43464 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.65■□□□□ 0.58
HTRA2O43464 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.65■□□□□ 0.58
HTRA2O43464 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
HTRA2O43464 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
HTRA2O43464 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.65■□□□□ 0.58
HTRA2O43464 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.65■□□□□ 0.58
HTRA2O43464 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HTRA2O43464 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.65■□□□□ 0.58
HTRA2O43464 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.65■□□□□ 0.58
HTRA2O43464 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTRA2O43464 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HTRA2O43464 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
HTRA2O43464 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.65■□□□□ 0.58
HTRA2O43464 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.65■□□□□ 0.58
HTRA2O43464 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.65■□□□□ 0.58
HTRA2O43464 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
HTRA2O43464 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTRA2O43464 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTRA2O43464 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTRA2O43464 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HTRA2O43464 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
HTRA2O43464 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
HTRA2O43464 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.65■□□□□ 0.58
HTRA2O43464 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTRA2O43464 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTRA2O43464 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HTRA2O43464 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTRA2O43464 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTRA2O43464 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.65■□□□□ 0.58
HTRA2O43464 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HTRA2O43464 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HTRA2O43464 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HTRA2O43464 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
HTRA2O43464 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HTRA2O43464 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HTRA2O43464 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.64■□□□□ 0.57
HTRA2O43464 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HTRA2O43464 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
HTRA2O43464 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HTRA2O43464 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
HTRA2O43464 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HTRA2O43464 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.64■□□□□ 0.57
HTRA2O43464 SPDYE15P-201ENST00000424157 909 ntBASIC18.64■□□□□ 0.57
HTRA2O43464 KRT18P38-201ENST00000449496 1282 ntBASIC18.64■□□□□ 0.57
HTRA2O43464 RASA4DP-201ENST00000460726 1199 ntBASIC18.64■□□□□ 0.57
HTRA2O43464 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HTRA2O43464 AC034232.1-201ENST00000506026 1064 ntBASIC18.64■□□□□ 0.57
HTRA2O43464 AL590326.2-201ENST00000625139 305 ntBASIC18.64■□□□□ 0.57
HTRA2O43464 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
HTRA2O43464 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HTRA2O43464 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HTRA2O43464 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HTRA2O43464 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
HTRA2O43464 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HTRA2O43464 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HTRA2O43464 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HTRA2O43464 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HTRA2O43464 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HTRA2O43464 MYLKP1-201ENST00000509077 1580 ntBASIC18.64■□□□□ 0.57
HTRA2O43464 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HTRA2O43464 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
HTRA2O43464 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HTRA2O43464 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HTRA2O43464 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HTRA2O43464 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
HTRA2O43464 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.63■□□□□ 0.57
HTRA2O43464 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HTRA2O43464 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
HTRA2O43464 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HTRA2O43464 MIR1224-201ENST00000408193 85 ntBASIC18.63■□□□□ 0.57
HTRA2O43464 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.63■□□□□ 0.57
HTRA2O43464 AC092647.4-201ENST00000457211 535 ntBASIC18.63■□□□□ 0.57
HTRA2O43464 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.63■□□□□ 0.57
HTRA2O43464 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.63■□□□□ 0.57
HTRA2O43464 LINC01238-205ENST00000567549 1107 ntBASIC18.63■□□□□ 0.57
HTRA2O43464 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
HTRA2O43464 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.63■□□□□ 0.57
HTRA2O43464 AC010331.1-201ENST00000611423 582 ntBASIC18.63■□□□□ 0.57
HTRA2O43464 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HTRA2O43464 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms