Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 BX088651.1-201ENST00000540551 451 ntBASIC18.53■□□□□ 0.56
PFDN6O15212 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.53■□□□□ 0.56
PFDN6O15212 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.53■□□□□ 0.56
PFDN6O15212 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.53■□□□□ 0.56
PFDN6O15212 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PFDN6O15212 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PFDN6O15212 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PFDN6O15212 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PFDN6O15212 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PFDN6O15212 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PFDN6O15212 GPAT2P1-201ENST00000444924 1672 ntBASIC18.53■□□□□ 0.56
PFDN6O15212 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PFDN6O15212 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.53■□□□□ 0.56
PFDN6O15212 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PFDN6O15212 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PFDN6O15212 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PFDN6O15212 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PFDN6O15212 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.53■□□□□ 0.56
PFDN6O15212 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PFDN6O15212 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PFDN6O15212 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
PFDN6O15212 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PFDN6O15212 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PFDN6O15212 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PFDN6O15212 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PFDN6O15212 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PFDN6O15212 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PFDN6O15212 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PFDN6O15212 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PFDN6O15212 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PFDN6O15212 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PFDN6O15212 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PFDN6O15212 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.52■□□□□ 0.56
PFDN6O15212 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.52■□□□□ 0.56
PFDN6O15212 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.52■□□□□ 0.56
PFDN6O15212 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.52■□□□□ 0.56
PFDN6O15212 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.52■□□□□ 0.56
PFDN6O15212 AL353719.1-201ENST00000566847 864 ntBASIC18.52■□□□□ 0.56
PFDN6O15212 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PFDN6O15212 AP000525.1-201ENST00000608286 694 ntBASIC18.52■□□□□ 0.56
PFDN6O15212 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.52■□□□□ 0.56
PFDN6O15212 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.52■□□□□ 0.56
PFDN6O15212 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PFDN6O15212 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PFDN6O15212 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PFDN6O15212 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
PFDN6O15212 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PFDN6O15212 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
PFDN6O15212 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PFDN6O15212 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.52■□□□□ 0.55
PFDN6O15212 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PFDN6O15212 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PFDN6O15212 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
PFDN6O15212 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
PFDN6O15212 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PFDN6O15212 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PFDN6O15212 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PFDN6O15212 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.51■□□□□ 0.55
PFDN6O15212 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PFDN6O15212 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PFDN6O15212 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.51■□□□□ 0.55
PFDN6O15212 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PFDN6O15212 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PFDN6O15212 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PFDN6O15212 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.51■□□□□ 0.55
PFDN6O15212 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
PFDN6O15212 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PFDN6O15212 MIR1238-201ENST00000408483 83 ntBASIC18.51■□□□□ 0.55
PFDN6O15212 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.51■□□□□ 0.55
PFDN6O15212 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PFDN6O15212 AC128688.1-201ENST00000487626 519 ntBASIC18.51■□□□□ 0.55
PFDN6O15212 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.51■□□□□ 0.55
PFDN6O15212 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PFDN6O15212 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.51■□□□□ 0.55
PFDN6O15212 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
PFDN6O15212 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PFDN6O15212 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PFDN6O15212 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.51■□□□□ 0.55
PFDN6O15212 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PFDN6O15212 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PFDN6O15212 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PFDN6O15212 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.51■□□□□ 0.55
PFDN6O15212 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PFDN6O15212 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
PFDN6O15212 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PFDN6O15212 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PFDN6O15212 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.51■□□□□ 0.55
PFDN6O15212 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PFDN6O15212 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PFDN6O15212 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PFDN6O15212 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.5■□□□□ 0.55
PFDN6O15212 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PFDN6O15212 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PFDN6O15212 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PFDN6O15212 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PFDN6O15212 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.5■□□□□ 0.55
PFDN6O15212 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PFDN6O15212 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.5■□□□□ 0.55
PFDN6O15212 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PFDN6O15212 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms