Protein–RNA interactions for Protein: B4DXG7

cDNA FLJ57652, highly similar to Ephrin-A3, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B4DXG7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
B4DXG7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
B4DXG7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.14■□□□□ 0.33
B4DXG7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
B4DXG7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.14■□□□□ 0.33
B4DXG7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.14■□□□□ 0.33
B4DXG7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
B4DXG7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.14■□□□□ 0.33
B4DXG7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
B4DXG7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
B4DXG7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
B4DXG7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.14■□□□□ 0.33
B4DXG7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
B4DXG7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
B4DXG7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
B4DXG7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
B4DXG7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
B4DXG7 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.13■□□□□ 0.33
B4DXG7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
B4DXG7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
B4DXG7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.13■□□□□ 0.33
B4DXG7 RCC2P3-201ENST00000418112 1537 ntBASIC17.13■□□□□ 0.33
B4DXG7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
B4DXG7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
B4DXG7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.13■□□□□ 0.33
B4DXG7 KRT18P57-201ENST00000443599 1254 ntBASIC17.13■□□□□ 0.33
B4DXG7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.13■□□□□ 0.33
B4DXG7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.13■□□□□ 0.33
B4DXG7 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.13■□□□□ 0.33
B4DXG7 AL138966.2-201ENST00000621997 464 ntBASIC17.13■□□□□ 0.33
B4DXG7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
B4DXG7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
B4DXG7 AC068587.9-201ENST00000641814 219 ntBASIC17.13■□□□□ 0.33
B4DXG7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
B4DXG7 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
B4DXG7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
B4DXG7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
B4DXG7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.13■□□□□ 0.33
B4DXG7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.13■□□□□ 0.33
B4DXG7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
B4DXG7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
B4DXG7 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
B4DXG7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
B4DXG7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
B4DXG7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
B4DXG7 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
B4DXG7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.13■□□□□ 0.33
B4DXG7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.13■□□□□ 0.33
B4DXG7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.13■□□□□ 0.33
B4DXG7 AC008556.1-201ENST00000610908 2040 ntBASIC17.13■□□□□ 0.33
B4DXG7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
B4DXG7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
B4DXG7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
B4DXG7 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
B4DXG7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.12■□□□□ 0.33
B4DXG7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
B4DXG7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
B4DXG7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
B4DXG7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
B4DXG7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
B4DXG7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.12■□□□□ 0.33
B4DXG7 MTMR9LP-203ENST00000426597 1545 ntBASIC17.12■□□□□ 0.33
B4DXG7 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
B4DXG7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
B4DXG7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
B4DXG7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.12■□□□□ 0.33
B4DXG7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
B4DXG7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
B4DXG7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.12■□□□□ 0.33
B4DXG7 AC128688.1-201ENST00000487626 519 ntBASIC17.12■□□□□ 0.33
B4DXG7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.12■□□□□ 0.33
B4DXG7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
B4DXG7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.12■□□□□ 0.33
B4DXG7 RN7SL850P-201ENST00000579959 291 ntBASIC17.12■□□□□ 0.33
B4DXG7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
B4DXG7 AC005363.2-201ENST00000618631 242 ntBASIC17.12■□□□□ 0.33
B4DXG7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
B4DXG7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
B4DXG7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
B4DXG7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.12■□□□□ 0.33
B4DXG7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
B4DXG7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
B4DXG7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.12■□□□□ 0.33
B4DXG7 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
B4DXG7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
B4DXG7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
B4DXG7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
B4DXG7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.11■□□□□ 0.33
B4DXG7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.11■□□□□ 0.33
B4DXG7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.11■□□□□ 0.33
B4DXG7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
B4DXG7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
B4DXG7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
B4DXG7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
B4DXG7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
B4DXG7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
B4DXG7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
B4DXG7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.11■□□□□ 0.33
B4DXG7 HMGA1P5-201ENST00000412453 271 ntBASIC17.11■□□□□ 0.33
B4DXG7 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms