Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC22.62■■□□□ 1.21
TRIM6-TRIM34B2RNG4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC22.62■■□□□ 1.21
TRIM6-TRIM34B2RNG4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRIM6-TRIM34B2RNG4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRIM6-TRIM34B2RNG4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
TRIM6-TRIM34B2RNG4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRIM6-TRIM34B2RNG4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRIM6-TRIM34B2RNG4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC22.62■■□□□ 1.21
TRIM6-TRIM34B2RNG4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM6-TRIM34B2RNG4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC22.61■■□□□ 1.21
TRIM6-TRIM34B2RNG4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM6-TRIM34B2RNG4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM6-TRIM34B2RNG4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM6-TRIM34B2RNG4 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM6-TRIM34B2RNG4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM6-TRIM34B2RNG4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM6-TRIM34B2RNG4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC22.61■■□□□ 1.21
TRIM6-TRIM34B2RNG4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM6-TRIM34B2RNG4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC22.61■■□□□ 1.21
TRIM6-TRIM34B2RNG4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM6-TRIM34B2RNG4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM6-TRIM34B2RNG4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM6-TRIM34B2RNG4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM6-TRIM34B2RNG4 LINC01568-207ENST00000641790 1380 ntBASIC22.61■■□□□ 1.21
TRIM6-TRIM34B2RNG4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM6-TRIM34B2RNG4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM6-TRIM34B2RNG4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
TRIM6-TRIM34B2RNG4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
TRIM6-TRIM34B2RNG4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM6-TRIM34B2RNG4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC22.61■■□□□ 1.21
TRIM6-TRIM34B2RNG4 EFTUD1P1-204ENST00000560401 1798 ntBASIC22.61■■□□□ 1.21
TRIM6-TRIM34B2RNG4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRIM6-TRIM34B2RNG4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRIM6-TRIM34B2RNG4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TRIM6-TRIM34B2RNG4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRIM6-TRIM34B2RNG4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRIM6-TRIM34B2RNG4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRIM6-TRIM34B2RNG4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC22.6■■□□□ 1.21
TRIM6-TRIM34B2RNG4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC22.6■■□□□ 1.21
TRIM6-TRIM34B2RNG4 AC087499.1-201ENST00000418141 1075 ntBASIC22.6■■□□□ 1.21
TRIM6-TRIM34B2RNG4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC22.6■■□□□ 1.21
TRIM6-TRIM34B2RNG4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TRIM6-TRIM34B2RNG4 KRT18P41-201ENST00000518924 1277 ntBASIC22.6■■□□□ 1.21
TRIM6-TRIM34B2RNG4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC22.6■■□□□ 1.21
TRIM6-TRIM34B2RNG4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC22.6■■□□□ 1.21
TRIM6-TRIM34B2RNG4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRIM6-TRIM34B2RNG4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC22.6■■□□□ 1.21
TRIM6-TRIM34B2RNG4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
TRIM6-TRIM34B2RNG4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC22.6■■□□□ 1.21
TRIM6-TRIM34B2RNG4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRIM6-TRIM34B2RNG4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRIM6-TRIM34B2RNG4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM6-TRIM34B2RNG4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
TRIM6-TRIM34B2RNG4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC22.59■■□□□ 1.21
TRIM6-TRIM34B2RNG4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM6-TRIM34B2RNG4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM6-TRIM34B2RNG4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM6-TRIM34B2RNG4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC22.59■■□□□ 1.21
TRIM6-TRIM34B2RNG4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
TRIM6-TRIM34B2RNG4 KRT8P50-201ENST00000562022 1438 ntBASIC22.59■■□□□ 1.21
TRIM6-TRIM34B2RNG4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM6-TRIM34B2RNG4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC22.59■■□□□ 1.21
TRIM6-TRIM34B2RNG4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM6-TRIM34B2RNG4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC22.59■■□□□ 1.21
TRIM6-TRIM34B2RNG4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC22.59■■□□□ 1.21
TRIM6-TRIM34B2RNG4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM6-TRIM34B2RNG4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM6-TRIM34B2RNG4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC22.59■■□□□ 1.21
TRIM6-TRIM34B2RNG4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM6-TRIM34B2RNG4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM6-TRIM34B2RNG4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM6-TRIM34B2RNG4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM6-TRIM34B2RNG4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM6-TRIM34B2RNG4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC22.59■■□□□ 1.21
TRIM6-TRIM34B2RNG4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM6-TRIM34B2RNG4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM6-TRIM34B2RNG4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC22.59■■□□□ 1.21
TRIM6-TRIM34B2RNG4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM6-TRIM34B2RNG4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
TRIM6-TRIM34B2RNG4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM6-TRIM34B2RNG4 AC135050.7-201ENST00000624508 2218 ntBASIC22.58■■□□□ 1.21
TRIM6-TRIM34B2RNG4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM6-TRIM34B2RNG4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM6-TRIM34B2RNG4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM6-TRIM34B2RNG4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC22.58■■□□□ 1.21
TRIM6-TRIM34B2RNG4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM6-TRIM34B2RNG4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM6-TRIM34B2RNG4 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM6-TRIM34B2RNG4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM6-TRIM34B2RNG4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM6-TRIM34B2RNG4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM6-TRIM34B2RNG4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC22.58■■□□□ 1.21
TRIM6-TRIM34B2RNG4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
TRIM6-TRIM34B2RNG4 KRT18P23-201ENST00000435622 1283 ntBASIC22.58■■□□□ 1.21
TRIM6-TRIM34B2RNG4 GXYLT1P3-201ENST00000453058 1193 ntBASIC22.58■■□□□ 1.21
TRIM6-TRIM34B2RNG4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM6-TRIM34B2RNG4 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.21
TRIM6-TRIM34B2RNG4 WWOX-216ENST00000569818 525 ntBASIC22.58■■□□□ 1.21
TRIM6-TRIM34B2RNG4 FAM87A-204ENST00000613235 858 ntBASIC22.58■■□□□ 1.21
TRIM6-TRIM34B2RNG4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms