Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLCA1A8K7I4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCA1A8K7I4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CLCA1A8K7I4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.29■□□□□ 0.36
CLCA1A8K7I4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.29■□□□□ 0.36
CLCA1A8K7I4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CLCA1A8K7I4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCA1A8K7I4 CRYGFP-201ENST00000418459 633 ntBASIC17.29■□□□□ 0.36
CLCA1A8K7I4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.29■□□□□ 0.36
CLCA1A8K7I4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLCA1A8K7I4 FAM207BP-201ENST00000447172 505 ntBASIC17.29■□□□□ 0.36
CLCA1A8K7I4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.29■□□□□ 0.36
CLCA1A8K7I4 AC008040.2-201ENST00000461049 708 ntBASIC17.29■□□□□ 0.36
CLCA1A8K7I4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.29■□□□□ 0.36
CLCA1A8K7I4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.29■□□□□ 0.36
CLCA1A8K7I4 SLC25A1P4-201ENST00000567977 778 ntBASIC17.29■□□□□ 0.36
CLCA1A8K7I4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.29■□□□□ 0.36
CLCA1A8K7I4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CLCA1A8K7I4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CLCA1A8K7I4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.29■□□□□ 0.36
CLCA1A8K7I4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.29■□□□□ 0.36
CLCA1A8K7I4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCA1A8K7I4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCA1A8K7I4 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.29■□□□□ 0.36
CLCA1A8K7I4 CYP2D8P-201ENST00000433633 1490 ntBASIC17.29■□□□□ 0.36
CLCA1A8K7I4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCA1A8K7I4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCA1A8K7I4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLCA1A8K7I4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.29■□□□□ 0.36
CLCA1A8K7I4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CLCA1A8K7I4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCA1A8K7I4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.29■□□□□ 0.36
CLCA1A8K7I4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCA1A8K7I4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCA1A8K7I4 AC073592.3-201ENST00000625118 1834 ntBASIC17.28■□□□□ 0.36
CLCA1A8K7I4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCA1A8K7I4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLCA1A8K7I4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CLCA1A8K7I4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
CLCA1A8K7I4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.28■□□□□ 0.36
CLCA1A8K7I4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.28■□□□□ 0.36
CLCA1A8K7I4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCA1A8K7I4 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.28■□□□□ 0.36
CLCA1A8K7I4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.28■□□□□ 0.36
CLCA1A8K7I4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLCA1A8K7I4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCA1A8K7I4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CLCA1A8K7I4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCA1A8K7I4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.28■□□□□ 0.36
CLCA1A8K7I4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.28■□□□□ 0.36
CLCA1A8K7I4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.28■□□□□ 0.36
CLCA1A8K7I4 AP005242.2-201ENST00000580065 1175 ntBASIC17.28■□□□□ 0.36
CLCA1A8K7I4 AC145285.6-201ENST00000604632 637 ntBASIC17.28■□□□□ 0.36
CLCA1A8K7I4 AP000692.2-201ENST00000608391 879 ntBASIC17.28■□□□□ 0.36
CLCA1A8K7I4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCA1A8K7I4 AC083906.6-201ENST00000641366 219 ntBASIC17.28■□□□□ 0.36
CLCA1A8K7I4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.28■□□□□ 0.36
CLCA1A8K7I4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.28■□□□□ 0.36
CLCA1A8K7I4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCA1A8K7I4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
CLCA1A8K7I4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CLCA1A8K7I4 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCA1A8K7I4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.28■□□□□ 0.36
CLCA1A8K7I4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CLCA1A8K7I4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLCA1A8K7I4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.28■□□□□ 0.36
CLCA1A8K7I4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCA1A8K7I4 LINC01568-207ENST00000641790 1380 ntBASIC17.28■□□□□ 0.36
CLCA1A8K7I4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.27■□□□□ 0.36
CLCA1A8K7I4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCA1A8K7I4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.27■□□□□ 0.36
CLCA1A8K7I4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCA1A8K7I4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCA1A8K7I4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCA1A8K7I4 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCA1A8K7I4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCA1A8K7I4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCA1A8K7I4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCA1A8K7I4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCA1A8K7I4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
CLCA1A8K7I4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CLCA1A8K7I4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CLCA1A8K7I4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.27■□□□□ 0.36
CLCA1A8K7I4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.27■□□□□ 0.36
CLCA1A8K7I4 AC091390.4-202ENST00000476426 537 ntBASIC17.27■□□□□ 0.36
CLCA1A8K7I4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.27■□□□□ 0.36
CLCA1A8K7I4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCA1A8K7I4 RN7SL850P-201ENST00000579959 291 ntBASIC17.27■□□□□ 0.36
CLCA1A8K7I4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CLCA1A8K7I4 AC010947.1-201ENST00000623454 693 ntBASIC17.27■□□□□ 0.36
CLCA1A8K7I4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCA1A8K7I4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.27■□□□□ 0.36
CLCA1A8K7I4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCA1A8K7I4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCA1A8K7I4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLCA1A8K7I4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCA1A8K7I4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CLCA1A8K7I4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.27■□□□□ 0.35
CLCA1A8K7I4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
CLCA1A8K7I4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms