Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
YJEFN3A6XGL0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
YJEFN3A6XGL0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
YJEFN3A6XGL0 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
YJEFN3A6XGL0 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
YJEFN3A6XGL0 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.25■□□□□ 0.67
YJEFN3A6XGL0 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
YJEFN3A6XGL0 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
YJEFN3A6XGL0 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.25■□□□□ 0.67
YJEFN3A6XGL0 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
YJEFN3A6XGL0 FAM86EP-206ENST00000510506 987 ntBASIC19.25■□□□□ 0.67
YJEFN3A6XGL0 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.25■□□□□ 0.67
YJEFN3A6XGL0 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
YJEFN3A6XGL0 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.25■□□□□ 0.67
YJEFN3A6XGL0 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.25■□□□□ 0.67
YJEFN3A6XGL0 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
YJEFN3A6XGL0 AL121956.5-201ENST00000625261 221 ntBASIC19.25■□□□□ 0.67
YJEFN3A6XGL0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
YJEFN3A6XGL0 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
YJEFN3A6XGL0 AC073592.3-201ENST00000625118 1834 ntBASIC19.25■□□□□ 0.67
YJEFN3A6XGL0 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
YJEFN3A6XGL0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
YJEFN3A6XGL0 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
YJEFN3A6XGL0 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.24■□□□□ 0.67
YJEFN3A6XGL0 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
YJEFN3A6XGL0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
YJEFN3A6XGL0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.24■□□□□ 0.67
YJEFN3A6XGL0 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
YJEFN3A6XGL0 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.24■□□□□ 0.67
YJEFN3A6XGL0 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
YJEFN3A6XGL0 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.24■□□□□ 0.67
YJEFN3A6XGL0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
YJEFN3A6XGL0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.24■□□□□ 0.67
YJEFN3A6XGL0 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.24■□□□□ 0.67
YJEFN3A6XGL0 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.24■□□□□ 0.67
YJEFN3A6XGL0 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.24■□□□□ 0.67
YJEFN3A6XGL0 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.24■□□□□ 0.67
YJEFN3A6XGL0 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.24■□□□□ 0.67
YJEFN3A6XGL0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.24■□□□□ 0.67
YJEFN3A6XGL0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.24■□□□□ 0.67
YJEFN3A6XGL0 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.24■□□□□ 0.67
YJEFN3A6XGL0 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
YJEFN3A6XGL0 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.24■□□□□ 0.67
YJEFN3A6XGL0 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
YJEFN3A6XGL0 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
YJEFN3A6XGL0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
YJEFN3A6XGL0 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.24■□□□□ 0.67
YJEFN3A6XGL0 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
YJEFN3A6XGL0 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
YJEFN3A6XGL0 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
YJEFN3A6XGL0 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
YJEFN3A6XGL0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.23■□□□□ 0.67
YJEFN3A6XGL0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
YJEFN3A6XGL0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
YJEFN3A6XGL0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
YJEFN3A6XGL0 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.23■□□□□ 0.67
YJEFN3A6XGL0 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
YJEFN3A6XGL0 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.23■□□□□ 0.67
YJEFN3A6XGL0 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.23■□□□□ 0.67
YJEFN3A6XGL0 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
YJEFN3A6XGL0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.23■□□□□ 0.67
YJEFN3A6XGL0 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
YJEFN3A6XGL0 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
YJEFN3A6XGL0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.23■□□□□ 0.67
YJEFN3A6XGL0 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.23■□□□□ 0.67
YJEFN3A6XGL0 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
YJEFN3A6XGL0 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.23■□□□□ 0.67
YJEFN3A6XGL0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
YJEFN3A6XGL0 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
YJEFN3A6XGL0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
YJEFN3A6XGL0 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
YJEFN3A6XGL0 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
YJEFN3A6XGL0 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
YJEFN3A6XGL0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
YJEFN3A6XGL0 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
YJEFN3A6XGL0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
YJEFN3A6XGL0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.22■□□□□ 0.67
YJEFN3A6XGL0 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
YJEFN3A6XGL0 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
YJEFN3A6XGL0 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.22■□□□□ 0.67
YJEFN3A6XGL0 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
YJEFN3A6XGL0 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
YJEFN3A6XGL0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.22■□□□□ 0.67
YJEFN3A6XGL0 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
YJEFN3A6XGL0 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
YJEFN3A6XGL0 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
YJEFN3A6XGL0 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
YJEFN3A6XGL0 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
YJEFN3A6XGL0 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
YJEFN3A6XGL0 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
YJEFN3A6XGL0 AL136038.3-201ENST00000561909 1096 ntBASIC19.22■□□□□ 0.67
YJEFN3A6XGL0 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
YJEFN3A6XGL0 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
YJEFN3A6XGL0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.22■□□□□ 0.67
YJEFN3A6XGL0 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
YJEFN3A6XGL0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
YJEFN3A6XGL0 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
YJEFN3A6XGL0 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
YJEFN3A6XGL0 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.22■□□□□ 0.67
YJEFN3A6XGL0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms