Protein–RNA interactions for Protein: A6NCI5

LINC00862, Putative transmembrane protein encoded by LINC00862, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00862A6NCI5 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC15.02■□□□□ -0
LINC00862A6NCI5 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC15.02■□□□□ -0
LINC00862A6NCI5 EXOG-217ENST00000630638 197 ntTSL 5 BASIC15.02■□□□□ -0
LINC00862A6NCI5 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00862A6NCI5 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00862A6NCI5 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
LINC00862A6NCI5 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.02□□□□□ -0.01
LINC00862A6NCI5 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00862A6NCI5 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00862A6NCI5 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00862A6NCI5 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.02□□□□□ -0.01
LINC00862A6NCI5 CYP2T1P-202ENST00000641596 2535 ntBASIC15.02□□□□□ -0.01
LINC00862A6NCI5 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.02□□□□□ -0.01
LINC00862A6NCI5 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.02□□□□□ -0.01
LINC00862A6NCI5 SYT6-210ENST00000641643 1587 ntBASIC15.02□□□□□ -0.01
LINC00862A6NCI5 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00862A6NCI5 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.02□□□□□ -0.01
LINC00862A6NCI5 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
LINC00862A6NCI5 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00862A6NCI5 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00862A6NCI5 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC15.02□□□□□ -0.01
LINC00862A6NCI5 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00862A6NCI5 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00862A6NCI5 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LINC00862A6NCI5 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.01□□□□□ -0.01
LINC00862A6NCI5 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00862A6NCI5 AL499627.1-201ENST00000569373 2188 ntBASIC15.01□□□□□ -0.01
LINC00862A6NCI5 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
LINC00862A6NCI5 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00862A6NCI5 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00862A6NCI5 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LINC00862A6NCI5 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00862A6NCI5 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00862A6NCI5 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.01□□□□□ -0.01
LINC00862A6NCI5 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00862A6NCI5 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00862A6NCI5 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC15.01□□□□□ -0.01
LINC00862A6NCI5 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC15.01□□□□□ -0.01
LINC00862A6NCI5 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
LINC00862A6NCI5 AC008175.2-201ENST00000612840 297 ntBASIC15.01□□□□□ -0.01
LINC00862A6NCI5 AL117332.1-201ENST00000622628 974 ntBASIC15.01□□□□□ -0.01
LINC00862A6NCI5 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.01□□□□□ -0.01
LINC00862A6NCI5 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LINC00862A6NCI5 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
LINC00862A6NCI5 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00862A6NCI5 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00862A6NCI5 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00862A6NCI5 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC15.01□□□□□ -0.01
LINC00862A6NCI5 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC15.01□□□□□ -0.01
LINC00862A6NCI5 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00862A6NCI5 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00862A6NCI5 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00862A6NCI5 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00862A6NCI5 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
LINC00862A6NCI5 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
LINC00862A6NCI5 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
LINC00862A6NCI5 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00862A6NCI5 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
LINC00862A6NCI5 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00862A6NCI5 KRT8P20-201ENST00000423953 1409 ntBASIC15□□□□□ -0.01
LINC00862A6NCI5 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00862A6NCI5 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC15□□□□□ -0.01
LINC00862A6NCI5 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00862A6NCI5 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00862A6NCI5 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
LINC00862A6NCI5 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
LINC00862A6NCI5 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00862A6NCI5 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00862A6NCI5 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00862A6NCI5 TSPY26P-202ENST00000565928 3884 ntBASIC15□□□□□ -0.01
LINC00862A6NCI5 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15□□□□□ -0.01
LINC00862A6NCI5 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00862A6NCI5 HES6-204ENST00000409182 863 ntTSL 2 BASIC15□□□□□ -0.01
LINC00862A6NCI5 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC15□□□□□ -0.01
LINC00862A6NCI5 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC15□□□□□ -0.01
LINC00862A6NCI5 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC15□□□□□ -0.01
LINC00862A6NCI5 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15□□□□□ -0.01
LINC00862A6NCI5 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00862A6NCI5 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00862A6NCI5 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15□□□□□ -0.01
LINC00862A6NCI5 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00862A6NCI5 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15□□□□□ -0.01
LINC00862A6NCI5 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00862A6NCI5 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC15□□□□□ -0.01
LINC00862A6NCI5 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00862A6NCI5 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00862A6NCI5 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15□□□□□ -0.01
LINC00862A6NCI5 AL096828.2-201ENST00000567259 1965 ntBASIC15□□□□□ -0.01
LINC00862A6NCI5 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15□□□□□ -0.01
LINC00862A6NCI5 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15□□□□□ -0.01
LINC00862A6NCI5 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00862A6NCI5 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC15□□□□□ -0.01
LINC00862A6NCI5 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15□□□□□ -0.01
LINC00862A6NCI5 AC005224.4-201ENST00000583262 1652 ntBASIC15□□□□□ -0.01
LINC00862A6NCI5 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
LINC00862A6NCI5 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00862A6NCI5 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00862A6NCI5 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00862A6NCI5 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.99□□□□□ -0.01
LINC00862A6NCI5 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms