Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 HOXB1-202ENST00000577092 1414 ntBASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 TSPY7P-201ENST00000431358 1114 ntBASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 PHB2-202ENST00000440277 996 ntTSL 5 BASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 AC009065.1-201ENST00000564055 1225 ntBASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRBV6-4A0A1B0GX49 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC13.05□□□□□ -0.32
TRBV6-4A0A1B0GX49 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRBV6-4A0A1B0GX49 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRBV6-4A0A1B0GX49 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
TRBV6-4A0A1B0GX49 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRBV6-4A0A1B0GX49 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC13.05□□□□□ -0.32
TRBV6-4A0A1B0GX49 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRBV6-4A0A1B0GX49 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TRBV6-4A0A1B0GX49 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
TRBV6-4A0A1B0GX49 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TRBV6-4A0A1B0GX49 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
TRBV6-4A0A1B0GX49 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TRBV6-4A0A1B0GX49 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRBV6-4A0A1B0GX49 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRBV6-4A0A1B0GX49 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRBV6-4A0A1B0GX49 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
TRBV6-4A0A1B0GX49 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
TRBV6-4A0A1B0GX49 HIST1H2APS4-201ENST00000362070 348 ntBASIC13.05□□□□□ -0.32
TRBV6-4A0A1B0GX49 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC13.05□□□□□ -0.32
TRBV6-4A0A1B0GX49 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC13.05□□□□□ -0.32
TRBV6-4A0A1B0GX49 WWOX-216ENST00000569818 525 ntBASIC13.05□□□□□ -0.32
TRBV6-4A0A1B0GX49 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC13.05□□□□□ -0.32
TRBV6-4A0A1B0GX49 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TRBV6-4A0A1B0GX49 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
TRBV6-4A0A1B0GX49 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRBV6-4A0A1B0GX49 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRBV6-4A0A1B0GX49 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRBV6-4A0A1B0GX49 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC13.05□□□□□ -0.32
TRBV6-4A0A1B0GX49 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
TRBV6-4A0A1B0GX49 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRBV6-4A0A1B0GX49 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRBV6-4A0A1B0GX49 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TRBV6-4A0A1B0GX49 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRBV6-4A0A1B0GX49 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
TRBV6-4A0A1B0GX49 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRBV6-4A0A1B0GX49 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
TRBV6-4A0A1B0GX49 KRT8P50-201ENST00000562022 1438 ntBASIC13.05□□□□□ -0.32
TRBV6-4A0A1B0GX49 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV6-4A0A1B0GX49 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV6-4A0A1B0GX49 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC13.04□□□□□ -0.32
TRBV6-4A0A1B0GX49 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV6-4A0A1B0GX49 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC13.04□□□□□ -0.32
TRBV6-4A0A1B0GX49 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV6-4A0A1B0GX49 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV6-4A0A1B0GX49 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV6-4A0A1B0GX49 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV6-4A0A1B0GX49 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV6-4A0A1B0GX49 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
TRBV6-4A0A1B0GX49 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC13.04□□□□□ -0.32
TRBV6-4A0A1B0GX49 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC13.04□□□□□ -0.32
TRBV6-4A0A1B0GX49 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC13.04□□□□□ -0.32
TRBV6-4A0A1B0GX49 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
TRBV6-4A0A1B0GX49 AP003041.3-201ENST00000527151 707 ntBASIC13.04□□□□□ -0.32
TRBV6-4A0A1B0GX49 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TRBV6-4A0A1B0GX49 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC13.04□□□□□ -0.32
TRBV6-4A0A1B0GX49 AP000525.1-201ENST00000608286 694 ntBASIC13.04□□□□□ -0.32
TRBV6-4A0A1B0GX49 SNX21-213ENST00000614929 587 ntTSL 5 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms