Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF103-CHMP3A0A140T963 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF103-CHMP3A0A140T963 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.83■□□□□ 0.44
RNF103-CHMP3A0A140T963 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF103-CHMP3A0A140T963 AC133681.1-201ENST00000465482 601 ntBASIC17.83■□□□□ 0.44
RNF103-CHMP3A0A140T963 Z85996.1-201ENST00000494644 937 ntBASIC17.83■□□□□ 0.44
RNF103-CHMP3A0A140T963 AC110285.5-201ENST00000611501 352 ntBASIC17.83■□□□□ 0.44
RNF103-CHMP3A0A140T963 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
RNF103-CHMP3A0A140T963 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.83■□□□□ 0.44
RNF103-CHMP3A0A140T963 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
RNF103-CHMP3A0A140T963 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
RNF103-CHMP3A0A140T963 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RNF103-CHMP3A0A140T963 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.83■□□□□ 0.44
RNF103-CHMP3A0A140T963 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF103-CHMP3A0A140T963 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF103-CHMP3A0A140T963 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.83■□□□□ 0.44
RNF103-CHMP3A0A140T963 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RNF103-CHMP3A0A140T963 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF103-CHMP3A0A140T963 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF103-CHMP3A0A140T963 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.83■□□□□ 0.44
RNF103-CHMP3A0A140T963 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
RNF103-CHMP3A0A140T963 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF103-CHMP3A0A140T963 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF103-CHMP3A0A140T963 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF103-CHMP3A0A140T963 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.82■□□□□ 0.44
RNF103-CHMP3A0A140T963 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF103-CHMP3A0A140T963 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF103-CHMP3A0A140T963 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF103-CHMP3A0A140T963 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF103-CHMP3A0A140T963 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF103-CHMP3A0A140T963 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF103-CHMP3A0A140T963 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF103-CHMP3A0A140T963 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF103-CHMP3A0A140T963 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF103-CHMP3A0A140T963 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF103-CHMP3A0A140T963 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RNF103-CHMP3A0A140T963 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.82■□□□□ 0.44
RNF103-CHMP3A0A140T963 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF103-CHMP3A0A140T963 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.82■□□□□ 0.44
RNF103-CHMP3A0A140T963 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF103-CHMP3A0A140T963 RN7SL471P-201ENST00000580476 299 ntBASIC17.82■□□□□ 0.44
RNF103-CHMP3A0A140T963 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RNF103-CHMP3A0A140T963 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.82■□□□□ 0.44
RNF103-CHMP3A0A140T963 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF103-CHMP3A0A140T963 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF103-CHMP3A0A140T963 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
RNF103-CHMP3A0A140T963 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF103-CHMP3A0A140T963 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF103-CHMP3A0A140T963 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RNF103-CHMP3A0A140T963 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF103-CHMP3A0A140T963 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
RNF103-CHMP3A0A140T963 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF103-CHMP3A0A140T963 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RNF103-CHMP3A0A140T963 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF103-CHMP3A0A140T963 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
RNF103-CHMP3A0A140T963 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF103-CHMP3A0A140T963 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF103-CHMP3A0A140T963 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF103-CHMP3A0A140T963 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF103-CHMP3A0A140T963 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF103-CHMP3A0A140T963 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF103-CHMP3A0A140T963 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF103-CHMP3A0A140T963 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF103-CHMP3A0A140T963 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF103-CHMP3A0A140T963 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF103-CHMP3A0A140T963 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
RNF103-CHMP3A0A140T963 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF103-CHMP3A0A140T963 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF103-CHMP3A0A140T963 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF103-CHMP3A0A140T963 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF103-CHMP3A0A140T963 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF103-CHMP3A0A140T963 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.81■□□□□ 0.44
RNF103-CHMP3A0A140T963 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF103-CHMP3A0A140T963 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
RNF103-CHMP3A0A140T963 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF103-CHMP3A0A140T963 AL445675.2-201ENST00000620291 557 ntBASIC17.81■□□□□ 0.44
RNF103-CHMP3A0A140T963 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF103-CHMP3A0A140T963 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF103-CHMP3A0A140T963 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF103-CHMP3A0A140T963 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF103-CHMP3A0A140T963 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF103-CHMP3A0A140T963 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF103-CHMP3A0A140T963 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.81■□□□□ 0.44
RNF103-CHMP3A0A140T963 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF103-CHMP3A0A140T963 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RNF103-CHMP3A0A140T963 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF103-CHMP3A0A140T963 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF103-CHMP3A0A140T963 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF103-CHMP3A0A140T963 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
RNF103-CHMP3A0A140T963 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF103-CHMP3A0A140T963 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF103-CHMP3A0A140T963 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF103-CHMP3A0A140T963 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
RNF103-CHMP3A0A140T963 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF103-CHMP3A0A140T963 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF103-CHMP3A0A140T963 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF103-CHMP3A0A140T963 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF103-CHMP3A0A140T963 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF103-CHMP3A0A140T963 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF103-CHMP3A0A140T963 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms