Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 SLC25A1P2-201ENST00000430693 912 ntBASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 COX11P1-201ENST00000489116 835 ntBASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 PRSS44-201ENST00000515154 1146 ntBASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 AC096733.2-201ENST00000609937 1394 ntBASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 AC139713.2-201ENST00000641328 2723 ntBASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA4Q9Y5G9 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
PCDHGA4Q9Y5G9 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHGA4Q9Y5G9 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDHGA4Q9Y5G9 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.27■□□□□ 0.52
PCDHGA4Q9Y5G9 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
PCDHGA4Q9Y5G9 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA4Q9Y5G9 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.27■□□□□ 0.52
PCDHGA4Q9Y5G9 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
PCDHGA4Q9Y5G9 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA4Q9Y5G9 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA4Q9Y5G9 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHGA4Q9Y5G9 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.27■□□□□ 0.52
PCDHGA4Q9Y5G9 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.27■□□□□ 0.52
PCDHGA4Q9Y5G9 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.27■□□□□ 0.52
PCDHGA4Q9Y5G9 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.27■□□□□ 0.52
PCDHGA4Q9Y5G9 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA4Q9Y5G9 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.27■□□□□ 0.52
PCDHGA4Q9Y5G9 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
PCDHGA4Q9Y5G9 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC18.27■□□□□ 0.52
PCDHGA4Q9Y5G9 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDHGA4Q9Y5G9 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA4Q9Y5G9 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHGA4Q9Y5G9 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGA4Q9Y5G9 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGA4Q9Y5G9 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.27■□□□□ 0.51
PCDHGA4Q9Y5G9 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGA4Q9Y5G9 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
PCDHGA4Q9Y5G9 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA4Q9Y5G9 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGA4Q9Y5G9 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PCDHGA4Q9Y5G9 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGA4Q9Y5G9 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA4Q9Y5G9 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHGA4Q9Y5G9 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHGA4Q9Y5G9 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA4Q9Y5G9 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA4Q9Y5G9 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA4Q9Y5G9 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA4Q9Y5G9 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA4Q9Y5G9 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA4Q9Y5G9 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDHGA4Q9Y5G9 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGA4Q9Y5G9 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
PCDHGA4Q9Y5G9 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHGA4Q9Y5G9 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
PCDHGA4Q9Y5G9 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGA4Q9Y5G9 TPM4P1-201ENST00000436100 807 ntBASIC18.26■□□□□ 0.51
PCDHGA4Q9Y5G9 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDHGA4Q9Y5G9 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDHGA4Q9Y5G9 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.26■□□□□ 0.51
PCDHGA4Q9Y5G9 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGA4Q9Y5G9 AC010653.2-201ENST00000623505 997 ntBASIC18.26■□□□□ 0.51
PCDHGA4Q9Y5G9 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PCDHGA4Q9Y5G9 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PCDHGA4Q9Y5G9 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHGA4Q9Y5G9 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA4Q9Y5G9 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA4Q9Y5G9 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA4Q9Y5G9 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.26■□□□□ 0.51
PCDHGA4Q9Y5G9 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms