Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP2BQ9UQN3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP2BQ9UQN3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP2BQ9UQN3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP2BQ9UQN3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP2BQ9UQN3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP2BQ9UQN3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP2BQ9UQN3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP2BQ9UQN3 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP2BQ9UQN3 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP2BQ9UQN3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP2BQ9UQN3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.86■□□□□ 0.61
CHMP2BQ9UQN3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP2BQ9UQN3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP2BQ9UQN3 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP2BQ9UQN3 AC128676.1-201ENST00000454392 318 ntBASIC18.86■□□□□ 0.61
CHMP2BQ9UQN3 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
CHMP2BQ9UQN3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.86■□□□□ 0.61
CHMP2BQ9UQN3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.86■□□□□ 0.61
CHMP2BQ9UQN3 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.86■□□□□ 0.61
CHMP2BQ9UQN3 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.86■□□□□ 0.61
CHMP2BQ9UQN3 AL031985.4-201ENST00000642138 673 ntBASIC18.86■□□□□ 0.61
CHMP2BQ9UQN3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CHMP2BQ9UQN3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP2BQ9UQN3 AC093677.2-201ENST00000600169 1863 ntBASIC18.86■□□□□ 0.61
CHMP2BQ9UQN3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CHMP2BQ9UQN3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.86■□□□□ 0.61
CHMP2BQ9UQN3 AC020916.1-201ENST00000587762 1774 ntBASIC18.86■□□□□ 0.61
CHMP2BQ9UQN3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
CHMP2BQ9UQN3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP2BQ9UQN3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP2BQ9UQN3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP2BQ9UQN3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP2BQ9UQN3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP2BQ9UQN3 ESPNP-201ENST00000270691 2015 ntBASIC18.85■□□□□ 0.61
CHMP2BQ9UQN3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CHMP2BQ9UQN3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP2BQ9UQN3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP2BQ9UQN3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CHMP2BQ9UQN3 AC106820.2-201ENST00000563775 3264 ntBASIC18.85■□□□□ 0.61
CHMP2BQ9UQN3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP2BQ9UQN3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP2BQ9UQN3 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP2BQ9UQN3 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.85■□□□□ 0.61
CHMP2BQ9UQN3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP2BQ9UQN3 AL353807.1-201ENST00000427475 662 ntBASIC18.85■□□□□ 0.61
CHMP2BQ9UQN3 FAM207BP-201ENST00000447172 505 ntBASIC18.85■□□□□ 0.61
CHMP2BQ9UQN3 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.85■□□□□ 0.61
CHMP2BQ9UQN3 AC026271.3-201ENST00000571884 352 ntBASIC18.85■□□□□ 0.61
CHMP2BQ9UQN3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.85■□□□□ 0.61
CHMP2BQ9UQN3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP2BQ9UQN3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP2BQ9UQN3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP2BQ9UQN3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CHMP2BQ9UQN3 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP2BQ9UQN3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.85■□□□□ 0.61
CHMP2BQ9UQN3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP2BQ9UQN3 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP2BQ9UQN3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.85■□□□□ 0.61
CHMP2BQ9UQN3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CHMP2BQ9UQN3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP2BQ9UQN3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.85■□□□□ 0.61
CHMP2BQ9UQN3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP2BQ9UQN3 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.84■□□□□ 0.61
CHMP2BQ9UQN3 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP2BQ9UQN3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.84■□□□□ 0.61
CHMP2BQ9UQN3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP2BQ9UQN3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP2BQ9UQN3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.84■□□□□ 0.61
CHMP2BQ9UQN3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.84■□□□□ 0.61
CHMP2BQ9UQN3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP2BQ9UQN3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP2BQ9UQN3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP2BQ9UQN3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP2BQ9UQN3 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
CHMP2BQ9UQN3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP2BQ9UQN3 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP2BQ9UQN3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.84■□□□□ 0.61
CHMP2BQ9UQN3 AC011506.1-201ENST00000474329 610 ntBASIC18.84■□□□□ 0.61
CHMP2BQ9UQN3 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.84■□□□□ 0.61
CHMP2BQ9UQN3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
CHMP2BQ9UQN3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.84■□□□□ 0.61
CHMP2BQ9UQN3 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CHMP2BQ9UQN3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.84■□□□□ 0.61
CHMP2BQ9UQN3 AC008556.1-201ENST00000610908 2040 ntBASIC18.84■□□□□ 0.61
CHMP2BQ9UQN3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CHMP2BQ9UQN3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP2BQ9UQN3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CHMP2BQ9UQN3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP2BQ9UQN3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP2BQ9UQN3 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
CHMP2BQ9UQN3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.84■□□□□ 0.61
CHMP2BQ9UQN3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.84■□□□□ 0.61
CHMP2BQ9UQN3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.84■□□□□ 0.61
CHMP2BQ9UQN3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHMP2BQ9UQN3 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
CHMP2BQ9UQN3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.83■□□□□ 0.61
CHMP2BQ9UQN3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CHMP2BQ9UQN3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CHMP2BQ9UQN3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms