Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
SALL4Q9UJQ4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
SALL4Q9UJQ4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SALL4Q9UJQ4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.7■□□□□ 0.74
SALL4Q9UJQ4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SALL4Q9UJQ4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SALL4Q9UJQ4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SALL4Q9UJQ4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.69■□□□□ 0.74
SALL4Q9UJQ4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SALL4Q9UJQ4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SALL4Q9UJQ4 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.69■□□□□ 0.74
SALL4Q9UJQ4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SALL4Q9UJQ4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SALL4Q9UJQ4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SALL4Q9UJQ4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SALL4Q9UJQ4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SALL4Q9UJQ4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.69■□□□□ 0.74
SALL4Q9UJQ4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SALL4Q9UJQ4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.69■□□□□ 0.74
SALL4Q9UJQ4 KSR1P1-201ENST00000446298 240 ntBASIC19.69■□□□□ 0.74
SALL4Q9UJQ4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.69■□□□□ 0.74
SALL4Q9UJQ4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.69■□□□□ 0.74
SALL4Q9UJQ4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SALL4Q9UJQ4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.69■□□□□ 0.74
SALL4Q9UJQ4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.69■□□□□ 0.74
SALL4Q9UJQ4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SALL4Q9UJQ4 AC130371.2-201ENST00000619443 611 ntBASIC19.69■□□□□ 0.74
SALL4Q9UJQ4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.69■□□□□ 0.74
SALL4Q9UJQ4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SALL4Q9UJQ4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.69■□□□□ 0.74
SALL4Q9UJQ4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.69■□□□□ 0.74
SALL4Q9UJQ4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.69■□□□□ 0.74
SALL4Q9UJQ4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SALL4Q9UJQ4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.68■□□□□ 0.74
SALL4Q9UJQ4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SALL4Q9UJQ4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SALL4Q9UJQ4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SALL4Q9UJQ4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.68■□□□□ 0.74
SALL4Q9UJQ4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SALL4Q9UJQ4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SALL4Q9UJQ4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SALL4Q9UJQ4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
SALL4Q9UJQ4 KRT18P41-201ENST00000518924 1277 ntBASIC19.68■□□□□ 0.74
SALL4Q9UJQ4 AC011298.2-201ENST00000617989 482 ntBASIC19.68■□□□□ 0.74
SALL4Q9UJQ4 REXO1L12P-201ENST00000622156 912 ntBASIC19.68■□□□□ 0.74
SALL4Q9UJQ4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SALL4Q9UJQ4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SALL4Q9UJQ4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.68■□□□□ 0.74
SALL4Q9UJQ4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SALL4Q9UJQ4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.68■□□□□ 0.74
SALL4Q9UJQ4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SALL4Q9UJQ4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SALL4Q9UJQ4 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SALL4Q9UJQ4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SALL4Q9UJQ4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SALL4Q9UJQ4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SALL4Q9UJQ4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SALL4Q9UJQ4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SALL4Q9UJQ4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.67■□□□□ 0.74
SALL4Q9UJQ4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
SALL4Q9UJQ4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SALL4Q9UJQ4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SALL4Q9UJQ4 AP002982.1-201ENST00000492365 877 ntBASIC19.67■□□□□ 0.74
SALL4Q9UJQ4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SALL4Q9UJQ4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.67■□□□□ 0.74
SALL4Q9UJQ4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SALL4Q9UJQ4 RARRES2P10-201ENST00000564312 460 ntBASIC19.67■□□□□ 0.74
SALL4Q9UJQ4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SALL4Q9UJQ4 AL049637.2-201ENST00000641778 930 ntBASIC19.67■□□□□ 0.74
SALL4Q9UJQ4 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SALL4Q9UJQ4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.67■□□□□ 0.74
SALL4Q9UJQ4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SALL4Q9UJQ4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SALL4Q9UJQ4 AL109659.2-201ENST00000606809 1674 ntBASIC19.67■□□□□ 0.74
SALL4Q9UJQ4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SALL4Q9UJQ4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SALL4Q9UJQ4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SALL4Q9UJQ4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SALL4Q9UJQ4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SALL4Q9UJQ4 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.67■□□□□ 0.74
SALL4Q9UJQ4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.67■□□□□ 0.74
SALL4Q9UJQ4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.67■□□□□ 0.74
SALL4Q9UJQ4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
SALL4Q9UJQ4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.67■□□□□ 0.74
SALL4Q9UJQ4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.66■□□□□ 0.74
SALL4Q9UJQ4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SALL4Q9UJQ4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SALL4Q9UJQ4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SALL4Q9UJQ4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SALL4Q9UJQ4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SALL4Q9UJQ4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.66■□□□□ 0.74
SALL4Q9UJQ4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
SALL4Q9UJQ4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.66■□□□□ 0.74
SALL4Q9UJQ4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SALL4Q9UJQ4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.66■□□□□ 0.74
SALL4Q9UJQ4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.66■□□□□ 0.74
SALL4Q9UJQ4 MESTP1-201ENST00000404287 994 ntBASIC19.66■□□□□ 0.74
SALL4Q9UJQ4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.66■□□□□ 0.74
SALL4Q9UJQ4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.66■□□□□ 0.74
SALL4Q9UJQ4 CR392000.1-201ENST00000624770 1228 ntBASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms