Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BLOC1S4Q9NUP1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.58■□□□□ 0.89
BLOC1S4Q9NUP1 AC093677.2-201ENST00000600169 1863 ntBASIC20.58■□□□□ 0.89
BLOC1S4Q9NUP1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BLOC1S4Q9NUP1 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BLOC1S4Q9NUP1 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BLOC1S4Q9NUP1 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BLOC1S4Q9NUP1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
BLOC1S4Q9NUP1 AC009102.3-201ENST00000623118 1491 ntBASIC20.58■□□□□ 0.89
BLOC1S4Q9NUP1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BLOC1S4Q9NUP1 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.58■□□□□ 0.89
BLOC1S4Q9NUP1 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BLOC1S4Q9NUP1 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BLOC1S4Q9NUP1 MIR149-201ENST00000384879 89 ntBASIC20.58■□□□□ 0.89
BLOC1S4Q9NUP1 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.58■□□□□ 0.89
BLOC1S4Q9NUP1 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.58■□□□□ 0.89
BLOC1S4Q9NUP1 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
BLOC1S4Q9NUP1 MIR3180-4-201ENST00000582223 153 ntBASIC20.58■□□□□ 0.89
BLOC1S4Q9NUP1 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.58■□□□□ 0.89
BLOC1S4Q9NUP1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.58■□□□□ 0.89
BLOC1S4Q9NUP1 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
BLOC1S4Q9NUP1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
BLOC1S4Q9NUP1 AL162741.1-201ENST00000565563 1558 ntBASIC20.58■□□□□ 0.88
BLOC1S4Q9NUP1 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BLOC1S4Q9NUP1 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
BLOC1S4Q9NUP1 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BLOC1S4Q9NUP1 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BLOC1S4Q9NUP1 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
BLOC1S4Q9NUP1 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
BLOC1S4Q9NUP1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BLOC1S4Q9NUP1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.58■□□□□ 0.88
BLOC1S4Q9NUP1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.58■□□□□ 0.88
BLOC1S4Q9NUP1 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BLOC1S4Q9NUP1 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BLOC1S4Q9NUP1 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BLOC1S4Q9NUP1 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BLOC1S4Q9NUP1 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.57■□□□□ 0.88
BLOC1S4Q9NUP1 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.57■□□□□ 0.88
BLOC1S4Q9NUP1 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.57■□□□□ 0.88
BLOC1S4Q9NUP1 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
BLOC1S4Q9NUP1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BLOC1S4Q9NUP1 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
BLOC1S4Q9NUP1 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.57■□□□□ 0.88
BLOC1S4Q9NUP1 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.57■□□□□ 0.88
BLOC1S4Q9NUP1 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BLOC1S4Q9NUP1 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.57■□□□□ 0.88
BLOC1S4Q9NUP1 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
BLOC1S4Q9NUP1 LINC01023-201ENST00000606054 436 ntBASIC20.57■□□□□ 0.88
BLOC1S4Q9NUP1 AL023973.1-201ENST00000624619 620 ntBASIC20.57■□□□□ 0.88
BLOC1S4Q9NUP1 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.57■□□□□ 0.88
BLOC1S4Q9NUP1 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BLOC1S4Q9NUP1 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
BLOC1S4Q9NUP1 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.57■□□□□ 0.88
BLOC1S4Q9NUP1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BLOC1S4Q9NUP1 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.57■□□□□ 0.88
BLOC1S4Q9NUP1 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
BLOC1S4Q9NUP1 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.57■□□□□ 0.88
BLOC1S4Q9NUP1 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.57■□□□□ 0.88
BLOC1S4Q9NUP1 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BLOC1S4Q9NUP1 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.56■□□□□ 0.88
BLOC1S4Q9NUP1 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
BLOC1S4Q9NUP1 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.56■□□□□ 0.88
BLOC1S4Q9NUP1 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
BLOC1S4Q9NUP1 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BLOC1S4Q9NUP1 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
BLOC1S4Q9NUP1 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BLOC1S4Q9NUP1 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
BLOC1S4Q9NUP1 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
BLOC1S4Q9NUP1 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.56■□□□□ 0.88
BLOC1S4Q9NUP1 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.56■□□□□ 0.88
BLOC1S4Q9NUP1 AL137013.1-201ENST00000432946 1228 ntBASIC20.56■□□□□ 0.88
BLOC1S4Q9NUP1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.56■□□□□ 0.88
BLOC1S4Q9NUP1 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.56■□□□□ 0.88
BLOC1S4Q9NUP1 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.56■□□□□ 0.88
BLOC1S4Q9NUP1 GCSHP2-201ENST00000560971 527 ntBASIC20.56■□□□□ 0.88
BLOC1S4Q9NUP1 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
BLOC1S4Q9NUP1 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
BLOC1S4Q9NUP1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.56■□□□□ 0.88
BLOC1S4Q9NUP1 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BLOC1S4Q9NUP1 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BLOC1S4Q9NUP1 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
BLOC1S4Q9NUP1 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BLOC1S4Q9NUP1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.56■□□□□ 0.88
BLOC1S4Q9NUP1 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.56■□□□□ 0.88
BLOC1S4Q9NUP1 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BLOC1S4Q9NUP1 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.55■□□□□ 0.88
BLOC1S4Q9NUP1 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.55■□□□□ 0.88
BLOC1S4Q9NUP1 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.55■□□□□ 0.88
BLOC1S4Q9NUP1 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
BLOC1S4Q9NUP1 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BLOC1S4Q9NUP1 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
BLOC1S4Q9NUP1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
BLOC1S4Q9NUP1 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BLOC1S4Q9NUP1 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.55■□□□□ 0.88
BLOC1S4Q9NUP1 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BLOC1S4Q9NUP1 AL441883.1-201ENST00000566170 1045 ntBASIC20.55■□□□□ 0.88
BLOC1S4Q9NUP1 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.55■□□□□ 0.88
BLOC1S4Q9NUP1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
BLOC1S4Q9NUP1 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
BLOC1S4Q9NUP1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms