Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB16Q9NRJ7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB16Q9NRJ7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB16Q9NRJ7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHB16Q9NRJ7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHB16Q9NRJ7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHB16Q9NRJ7 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.1■□□□□ 0.17
PCDHB16Q9NRJ7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB16Q9NRJ7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
PCDHB16Q9NRJ7 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB16Q9NRJ7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
PCDHB16Q9NRJ7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB16Q9NRJ7 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB16Q9NRJ7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHB16Q9NRJ7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHB16Q9NRJ7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHB16Q9NRJ7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.1■□□□□ 0.17
PCDHB16Q9NRJ7 CD99P1-205ENST00000527459 561 ntBASIC16.1■□□□□ 0.17
PCDHB16Q9NRJ7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB16Q9NRJ7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB16Q9NRJ7 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB16Q9NRJ7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB16Q9NRJ7 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.1■□□□□ 0.17
PCDHB16Q9NRJ7 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PCDHB16Q9NRJ7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB16Q9NRJ7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PCDHB16Q9NRJ7 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB16Q9NRJ7 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHB16Q9NRJ7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHB16Q9NRJ7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB16Q9NRJ7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB16Q9NRJ7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB16Q9NRJ7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHB16Q9NRJ7 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB16Q9NRJ7 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB16Q9NRJ7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB16Q9NRJ7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB16Q9NRJ7 KRT16P5-201ENST00000455284 522 ntBASIC16.09■□□□□ 0.17
PCDHB16Q9NRJ7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDHB16Q9NRJ7 AP003097.1-201ENST00000530657 1135 ntBASIC16.09■□□□□ 0.17
PCDHB16Q9NRJ7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PCDHB16Q9NRJ7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.09■□□□□ 0.17
PCDHB16Q9NRJ7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHB16Q9NRJ7 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHB16Q9NRJ7 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.09■□□□□ 0.17
PCDHB16Q9NRJ7 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PCDHB16Q9NRJ7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB16Q9NRJ7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB16Q9NRJ7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB16Q9NRJ7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHB16Q9NRJ7 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB16Q9NRJ7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB16Q9NRJ7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHB16Q9NRJ7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.08■□□□□ 0.17
PCDHB16Q9NRJ7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHB16Q9NRJ7 AL513477.1-201ENST00000602865 2407 ntBASIC16.08■□□□□ 0.17
PCDHB16Q9NRJ7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.08■□□□□ 0.17
PCDHB16Q9NRJ7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.08■□□□□ 0.17
PCDHB16Q9NRJ7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
PCDHB16Q9NRJ7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHB16Q9NRJ7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHB16Q9NRJ7 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB16Q9NRJ7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB16Q9NRJ7 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHB16Q9NRJ7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB16Q9NRJ7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PCDHB16Q9NRJ7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHB16Q9NRJ7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHB16Q9NRJ7 MTDHP1-201ENST00000605323 784 ntBASIC16.08■□□□□ 0.16
PCDHB16Q9NRJ7 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB16Q9NRJ7 AC131212.4-201ENST00000623606 975 ntBASIC16.08■□□□□ 0.16
PCDHB16Q9NRJ7 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHB16Q9NRJ7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHB16Q9NRJ7 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB16Q9NRJ7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PCDHB16Q9NRJ7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB16Q9NRJ7 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB16Q9NRJ7 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHB16Q9NRJ7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB16Q9NRJ7 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB16Q9NRJ7 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB16Q9NRJ7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHB16Q9NRJ7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHB16Q9NRJ7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB16Q9NRJ7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB16Q9NRJ7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB16Q9NRJ7 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.08■□□□□ 0.16
PCDHB16Q9NRJ7 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB16Q9NRJ7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB16Q9NRJ7 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHB16Q9NRJ7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB16Q9NRJ7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHB16Q9NRJ7 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PCDHB16Q9NRJ7 AC009113.1-201ENST00000570267 2443 ntBASIC16.07■□□□□ 0.16
PCDHB16Q9NRJ7 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB16Q9NRJ7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB16Q9NRJ7 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PCDHB16Q9NRJ7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHB16Q9NRJ7 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHB16Q9NRJ7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms