Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MKKSQ9NPJ1 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
MKKSQ9NPJ1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MKKSQ9NPJ1 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MKKSQ9NPJ1 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MKKSQ9NPJ1 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MKKSQ9NPJ1 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
MKKSQ9NPJ1 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MKKSQ9NPJ1 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MKKSQ9NPJ1 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.52■□□□□ 0.4
MKKSQ9NPJ1 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.52■□□□□ 0.4
MKKSQ9NPJ1 MIR3917-201ENST00000580971 93 ntBASIC17.52■□□□□ 0.4
MKKSQ9NPJ1 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
MKKSQ9NPJ1 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.52■□□□□ 0.4
MKKSQ9NPJ1 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
MKKSQ9NPJ1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
MKKSQ9NPJ1 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.52■□□□□ 0.4
MKKSQ9NPJ1 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.52■□□□□ 0.4
MKKSQ9NPJ1 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MKKSQ9NPJ1 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.52■□□□□ 0.39
MKKSQ9NPJ1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
MKKSQ9NPJ1 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
MKKSQ9NPJ1 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
MKKSQ9NPJ1 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
MKKSQ9NPJ1 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
MKKSQ9NPJ1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
MKKSQ9NPJ1 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
MKKSQ9NPJ1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.52■□□□□ 0.39
MKKSQ9NPJ1 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.52■□□□□ 0.39
MKKSQ9NPJ1 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 AL357033.4-201ENST00000617703 1807 ntBASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 MIR3180-4-201ENST00000582223 153 ntBASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 MTMR9LP-203ENST00000426597 1545 ntBASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.51■□□□□ 0.39
MKKSQ9NPJ1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MKKSQ9NPJ1 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MKKSQ9NPJ1 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MKKSQ9NPJ1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MKKSQ9NPJ1 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MKKSQ9NPJ1 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MKKSQ9NPJ1 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
MKKSQ9NPJ1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MKKSQ9NPJ1 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
MKKSQ9NPJ1 LINC01311-201ENST00000565162 1445 ntBASIC17.5■□□□□ 0.39
MKKSQ9NPJ1 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
MKKSQ9NPJ1 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.5■□□□□ 0.39
MKKSQ9NPJ1 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MKKSQ9NPJ1 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
MKKSQ9NPJ1 AC010240.3-201ENST00000607688 395 ntBASIC17.5■□□□□ 0.39
MKKSQ9NPJ1 AC091076.1-201ENST00000610741 619 ntBASIC17.5■□□□□ 0.39
MKKSQ9NPJ1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MKKSQ9NPJ1 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.5■□□□□ 0.39
MKKSQ9NPJ1 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MKKSQ9NPJ1 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.5■□□□□ 0.39
MKKSQ9NPJ1 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
MKKSQ9NPJ1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MKKSQ9NPJ1 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MKKSQ9NPJ1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
MKKSQ9NPJ1 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
MKKSQ9NPJ1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MKKSQ9NPJ1 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
MKKSQ9NPJ1 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MKKSQ9NPJ1 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MKKSQ9NPJ1 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms