Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.87■□□□□ 0.77
SIX2Q9NPC8 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.87■□□□□ 0.77
SIX2Q9NPC8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.87■□□□□ 0.77
SIX2Q9NPC8 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SIX2Q9NPC8 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.87■□□□□ 0.77
SIX2Q9NPC8 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SIX2Q9NPC8 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SIX2Q9NPC8 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SIX2Q9NPC8 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SIX2Q9NPC8 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.87■□□□□ 0.77
SIX2Q9NPC8 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SIX2Q9NPC8 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SIX2Q9NPC8 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SIX2Q9NPC8 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SIX2Q9NPC8 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SIX2Q9NPC8 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SIX2Q9NPC8 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
SIX2Q9NPC8 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SIX2Q9NPC8 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SIX2Q9NPC8 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SIX2Q9NPC8 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SIX2Q9NPC8 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SIX2Q9NPC8 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.86■□□□□ 0.77
SIX2Q9NPC8 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SIX2Q9NPC8 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.86■□□□□ 0.77
SIX2Q9NPC8 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.86■□□□□ 0.77
SIX2Q9NPC8 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SIX2Q9NPC8 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.86■□□□□ 0.77
SIX2Q9NPC8 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SIX2Q9NPC8 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SIX2Q9NPC8 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SIX2Q9NPC8 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SIX2Q9NPC8 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SIX2Q9NPC8 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.86■□□□□ 0.77
SIX2Q9NPC8 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.86■□□□□ 0.77
SIX2Q9NPC8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.85■□□□□ 0.77
SIX2Q9NPC8 PHGDH-209ENST00000641074 1780 ntBASIC19.85■□□□□ 0.77
SIX2Q9NPC8 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SIX2Q9NPC8 REXO1L9P-201ENST00000604264 2108 ntBASIC19.85■□□□□ 0.77
SIX2Q9NPC8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.85■□□□□ 0.77
SIX2Q9NPC8 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SIX2Q9NPC8 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SIX2Q9NPC8 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.85■□□□□ 0.77
SIX2Q9NPC8 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SIX2Q9NPC8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.85■□□□□ 0.77
SIX2Q9NPC8 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SIX2Q9NPC8 MIR149-201ENST00000384879 89 ntBASIC19.85■□□□□ 0.77
SIX2Q9NPC8 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.85■□□□□ 0.77
SIX2Q9NPC8 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
SIX2Q9NPC8 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SIX2Q9NPC8 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.85■□□□□ 0.77
SIX2Q9NPC8 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
SIX2Q9NPC8 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
SIX2Q9NPC8 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SIX2Q9NPC8 FAM87A-204ENST00000613235 858 ntBASIC19.85■□□□□ 0.77
SIX2Q9NPC8 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
SIX2Q9NPC8 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SIX2Q9NPC8 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.85■□□□□ 0.77
SIX2Q9NPC8 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SIX2Q9NPC8 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SIX2Q9NPC8 KRT8P7-201ENST00000533003 1432 ntBASIC19.85■□□□□ 0.77
SIX2Q9NPC8 AC005332.8-201ENST00000622750 2735 ntBASIC19.84■□□□□ 0.77
SIX2Q9NPC8 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SIX2Q9NPC8 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SIX2Q9NPC8 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SIX2Q9NPC8 GMCL1P1-201ENST00000463439 1581 ntBASIC19.84■□□□□ 0.77
SIX2Q9NPC8 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SIX2Q9NPC8 MMP23A-201ENST00000234610 1017 ntBASIC19.84■□□□□ 0.77
SIX2Q9NPC8 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SIX2Q9NPC8 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SIX2Q9NPC8 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
SIX2Q9NPC8 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.84■□□□□ 0.77
SIX2Q9NPC8 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SIX2Q9NPC8 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SIX2Q9NPC8 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SIX2Q9NPC8 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.84■□□□□ 0.77
SIX2Q9NPC8 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SIX2Q9NPC8 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SIX2Q9NPC8 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SIX2Q9NPC8 AC009102.3-201ENST00000623118 1491 ntBASIC19.84■□□□□ 0.77
SIX2Q9NPC8 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.84■□□□□ 0.77
SIX2Q9NPC8 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SIX2Q9NPC8 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SIX2Q9NPC8 AC067852.2-201ENST00000590513 2313 ntBASIC19.84■□□□□ 0.77
SIX2Q9NPC8 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SIX2Q9NPC8 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SIX2Q9NPC8 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.83■□□□□ 0.77
SIX2Q9NPC8 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SIX2Q9NPC8 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.83■□□□□ 0.77
SIX2Q9NPC8 AL096828.2-201ENST00000567259 1965 ntBASIC19.83■□□□□ 0.77
SIX2Q9NPC8 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SIX2Q9NPC8 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.83■□□□□ 0.77
SIX2Q9NPC8 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
SIX2Q9NPC8 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
SIX2Q9NPC8 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.83■□□□□ 0.77
SIX2Q9NPC8 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
SIX2Q9NPC8 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
SIX2Q9NPC8 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SIX2Q9NPC8 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.83■□□□□ 0.77
SIX2Q9NPC8 AC093827.2-201ENST00000512654 315 ntBASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms