Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CD248Q9HCU0 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.43■□□□□ 0.7
CD248Q9HCU0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD248Q9HCU0 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD248Q9HCU0 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD248Q9HCU0 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.43■□□□□ 0.7
CD248Q9HCU0 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD248Q9HCU0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD248Q9HCU0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.42■□□□□ 0.7
CD248Q9HCU0 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD248Q9HCU0 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD248Q9HCU0 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.42■□□□□ 0.7
CD248Q9HCU0 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CD248Q9HCU0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.42■□□□□ 0.7
CD248Q9HCU0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.42■□□□□ 0.7
CD248Q9HCU0 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.42■□□□□ 0.7
CD248Q9HCU0 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD248Q9HCU0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CD248Q9HCU0 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CD248Q9HCU0 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
CD248Q9HCU0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD248Q9HCU0 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CD248Q9HCU0 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CD248Q9HCU0 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD248Q9HCU0 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD248Q9HCU0 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.42■□□□□ 0.7
CD248Q9HCU0 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.42■□□□□ 0.7
CD248Q9HCU0 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.42■□□□□ 0.7
CD248Q9HCU0 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD248Q9HCU0 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CD248Q9HCU0 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CD248Q9HCU0 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD248Q9HCU0 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CD248Q9HCU0 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
CD248Q9HCU0 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
CD248Q9HCU0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.41■□□□□ 0.7
CD248Q9HCU0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD248Q9HCU0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.41■□□□□ 0.7
CD248Q9HCU0 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CD248Q9HCU0 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.41■□□□□ 0.7
CD248Q9HCU0 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CD248Q9HCU0 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD248Q9HCU0 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.41■□□□□ 0.7
CD248Q9HCU0 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD248Q9HCU0 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.41■□□□□ 0.7
CD248Q9HCU0 AP003041.3-201ENST00000527151 707 ntBASIC19.41■□□□□ 0.7
CD248Q9HCU0 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD248Q9HCU0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
CD248Q9HCU0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD248Q9HCU0 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CD248Q9HCU0 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD248Q9HCU0 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD248Q9HCU0 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CD248Q9HCU0 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD248Q9HCU0 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD248Q9HCU0 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CD248Q9HCU0 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.41■□□□□ 0.7
CD248Q9HCU0 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.41■□□□□ 0.7
CD248Q9HCU0 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CD248Q9HCU0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD248Q9HCU0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD248Q9HCU0 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD248Q9HCU0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.4■□□□□ 0.7
CD248Q9HCU0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD248Q9HCU0 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD248Q9HCU0 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.4■□□□□ 0.7
CD248Q9HCU0 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD248Q9HCU0 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD248Q9HCU0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CD248Q9HCU0 AC009053.2-201ENST00000563701 2365 ntBASIC19.4■□□□□ 0.7
CD248Q9HCU0 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD248Q9HCU0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CD248Q9HCU0 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.4■□□□□ 0.7
CD248Q9HCU0 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CD248Q9HCU0 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD248Q9HCU0 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.4■□□□□ 0.7
CD248Q9HCU0 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.4■□□□□ 0.7
CD248Q9HCU0 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.4■□□□□ 0.7
CD248Q9HCU0 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.4■□□□□ 0.7
CD248Q9HCU0 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.4■□□□□ 0.7
CD248Q9HCU0 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.4■□□□□ 0.7
CD248Q9HCU0 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD248Q9HCU0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CD248Q9HCU0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CD248Q9HCU0 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD248Q9HCU0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD248Q9HCU0 KRT8P11-201ENST00000409686 1436 ntBASIC19.4■□□□□ 0.7
CD248Q9HCU0 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CD248Q9HCU0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
CD248Q9HCU0 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.4■□□□□ 0.7
CD248Q9HCU0 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD248Q9HCU0 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
CD248Q9HCU0 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.7
CD248Q9HCU0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CD248Q9HCU0 PRORSD1P-202ENST00000563365 2154 ntBASIC19.39■□□□□ 0.69
CD248Q9HCU0 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
CD248Q9HCU0 AC067852.2-201ENST00000590513 2313 ntBASIC19.39■□□□□ 0.69
CD248Q9HCU0 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD248Q9HCU0 AC091076.1-201ENST00000610741 619 ntBASIC19.39■□□□□ 0.69
CD248Q9HCU0 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms