Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHD8Q9HCK8 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CHD8Q9HCK8 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHD8Q9HCK8 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.15■□□□□ 0.34
CHD8Q9HCK8 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.15■□□□□ 0.34
CHD8Q9HCK8 ARSEP1-201ENST00000420443 635 ntBASIC17.15■□□□□ 0.34
CHD8Q9HCK8 AC055876.3-201ENST00000431496 288 ntBASIC17.15■□□□□ 0.34
CHD8Q9HCK8 TSPY16P-201ENST00000449843 468 ntBASIC17.15■□□□□ 0.34
CHD8Q9HCK8 AC136632.2-201ENST00000512891 861 ntBASIC17.15■□□□□ 0.34
CHD8Q9HCK8 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.15■□□□□ 0.34
CHD8Q9HCK8 AC138649.4-201ENST00000612222 287 ntBASIC17.15■□□□□ 0.34
CHD8Q9HCK8 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
CHD8Q9HCK8 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHD8Q9HCK8 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.14■□□□□ 0.33
CHD8Q9HCK8 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHD8Q9HCK8 CRB3P1-201ENST00000449338 276 ntBASIC17.14■□□□□ 0.33
CHD8Q9HCK8 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.14■□□□□ 0.33
CHD8Q9HCK8 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHD8Q9HCK8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHD8Q9HCK8 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHD8Q9HCK8 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHD8Q9HCK8 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHD8Q9HCK8 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.14■□□□□ 0.33
CHD8Q9HCK8 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHD8Q9HCK8 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHD8Q9HCK8 AC004945.1-201ENST00000416738 983 ntBASIC17.14■□□□□ 0.33
CHD8Q9HCK8 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.14■□□□□ 0.33
CHD8Q9HCK8 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.14■□□□□ 0.33
CHD8Q9HCK8 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.14■□□□□ 0.33
CHD8Q9HCK8 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.14■□□□□ 0.33
CHD8Q9HCK8 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.14■□□□□ 0.33
CHD8Q9HCK8 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.14■□□□□ 0.33
CHD8Q9HCK8 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.14■□□□□ 0.33
CHD8Q9HCK8 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.14■□□□□ 0.33
CHD8Q9HCK8 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CHD8Q9HCK8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHD8Q9HCK8 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CHD8Q9HCK8 AC006333.2-201ENST00000607957 2099 ntBASIC17.14■□□□□ 0.33
CHD8Q9HCK8 ZNF815P-204ENST00000434898 1737 ntBASIC17.14■□□□□ 0.33
CHD8Q9HCK8 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHD8Q9HCK8 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHD8Q9HCK8 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.13■□□□□ 0.33
CHD8Q9HCK8 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC17.13■□□□□ 0.33
CHD8Q9HCK8 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.13■□□□□ 0.33
CHD8Q9HCK8 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHD8Q9HCK8 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHD8Q9HCK8 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.13■□□□□ 0.33
CHD8Q9HCK8 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.13■□□□□ 0.33
CHD8Q9HCK8 TERF1P3-201ENST00000505638 1227 ntBASIC17.13■□□□□ 0.33
CHD8Q9HCK8 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CHD8Q9HCK8 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.13■□□□□ 0.33
CHD8Q9HCK8 AC025678.2-201ENST00000562061 970 ntBASIC17.13■□□□□ 0.33
CHD8Q9HCK8 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.13■□□□□ 0.33
CHD8Q9HCK8 AL390955.2-201ENST00000603032 514 ntBASIC17.13■□□□□ 0.33
CHD8Q9HCK8 AC092902.6-201ENST00000641783 218 ntBASIC17.13■□□□□ 0.33
CHD8Q9HCK8 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.13■□□□□ 0.33
CHD8Q9HCK8 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHD8Q9HCK8 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.13■□□□□ 0.33
CHD8Q9HCK8 AC004817.3-201ENST00000602957 2129 ntBASIC17.13■□□□□ 0.33
CHD8Q9HCK8 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHD8Q9HCK8 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.13■□□□□ 0.33
CHD8Q9HCK8 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHD8Q9HCK8 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHD8Q9HCK8 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHD8Q9HCK8 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.13■□□□□ 0.33
CHD8Q9HCK8 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHD8Q9HCK8 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.13■□□□□ 0.33
CHD8Q9HCK8 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHD8Q9HCK8 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHD8Q9HCK8 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CHD8Q9HCK8 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.13■□□□□ 0.33
CHD8Q9HCK8 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CHD8Q9HCK8 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.12■□□□□ 0.33
CHD8Q9HCK8 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC17.12■□□□□ 0.33
CHD8Q9HCK8 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHD8Q9HCK8 HCG4B-203ENST00000450128 991 ntBASIC17.12■□□□□ 0.33
CHD8Q9HCK8 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.12■□□□□ 0.33
CHD8Q9HCK8 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHD8Q9HCK8 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.12■□□□□ 0.33
CHD8Q9HCK8 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.12■□□□□ 0.33
CHD8Q9HCK8 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHD8Q9HCK8 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHD8Q9HCK8 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHD8Q9HCK8 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHD8Q9HCK8 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
CHD8Q9HCK8 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHD8Q9HCK8 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHD8Q9HCK8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHD8Q9HCK8 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHD8Q9HCK8 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHD8Q9HCK8 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.12■□□□□ 0.33
CHD8Q9HCK8 TFAMP1-201ENST00000412727 736 ntBASIC17.12■□□□□ 0.33
CHD8Q9HCK8 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.12■□□□□ 0.33
CHD8Q9HCK8 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHD8Q9HCK8 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHD8Q9HCK8 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHD8Q9HCK8 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHD8Q9HCK8 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC17.12■□□□□ 0.33
CHD8Q9HCK8 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CHD8Q9HCK8 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms