Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATXN3LQ9H3M9 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATXN3LQ9H3M9 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATXN3LQ9H3M9 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATXN3LQ9H3M9 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATXN3LQ9H3M9 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATXN3LQ9H3M9 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATXN3LQ9H3M9 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATXN3LQ9H3M9 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATXN3LQ9H3M9 TSPY22P-201ENST00000427496 604 ntBASIC19.42■□□□□ 0.7
ATXN3LQ9H3M9 PRELID1P1-202ENST00000567272 903 ntBASIC19.42■□□□□ 0.7
ATXN3LQ9H3M9 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATXN3LQ9H3M9 AL691432.3-201ENST00000621860 400 ntBASIC19.42■□□□□ 0.7
ATXN3LQ9H3M9 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.42■□□□□ 0.7
ATXN3LQ9H3M9 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATXN3LQ9H3M9 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.42■□□□□ 0.7
ATXN3LQ9H3M9 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
ATXN3LQ9H3M9 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATXN3LQ9H3M9 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATXN3LQ9H3M9 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
ATXN3LQ9H3M9 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.41■□□□□ 0.7
ATXN3LQ9H3M9 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATXN3LQ9H3M9 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATXN3LQ9H3M9 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATXN3LQ9H3M9 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATXN3LQ9H3M9 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATXN3LQ9H3M9 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.41■□□□□ 0.7
ATXN3LQ9H3M9 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATXN3LQ9H3M9 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATXN3LQ9H3M9 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATXN3LQ9H3M9 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATXN3LQ9H3M9 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.41■□□□□ 0.7
ATXN3LQ9H3M9 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.41■□□□□ 0.7
ATXN3LQ9H3M9 AP002383.4-201ENST00000442518 975 ntBASIC19.41■□□□□ 0.7
ATXN3LQ9H3M9 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATXN3LQ9H3M9 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATXN3LQ9H3M9 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.41■□□□□ 0.7
ATXN3LQ9H3M9 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.41■□□□□ 0.7
ATXN3LQ9H3M9 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.41■□□□□ 0.7
ATXN3LQ9H3M9 AP002414.4-201ENST00000589764 1148 ntBASIC19.41■□□□□ 0.7
ATXN3LQ9H3M9 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.41■□□□□ 0.7
ATXN3LQ9H3M9 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.41■□□□□ 0.7
ATXN3LQ9H3M9 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.41■□□□□ 0.7
ATXN3LQ9H3M9 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATXN3LQ9H3M9 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.41■□□□□ 0.7
ATXN3LQ9H3M9 AC018445.3-201ENST00000624177 1945 ntBASIC19.41■□□□□ 0.7
ATXN3LQ9H3M9 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
ATXN3LQ9H3M9 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATXN3LQ9H3M9 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.41■□□□□ 0.7
ATXN3LQ9H3M9 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATXN3LQ9H3M9 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATXN3LQ9H3M9 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATXN3LQ9H3M9 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ATXN3LQ9H3M9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATXN3LQ9H3M9 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATXN3LQ9H3M9 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATXN3LQ9H3M9 CHCHD2P8-201ENST00000429873 447 ntBASIC19.4■□□□□ 0.7
ATXN3LQ9H3M9 TPM4P1-201ENST00000436100 807 ntBASIC19.4■□□□□ 0.7
ATXN3LQ9H3M9 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.4■□□□□ 0.7
ATXN3LQ9H3M9 RNF126P1-202ENST00000569893 925 ntBASIC19.4■□□□□ 0.7
ATXN3LQ9H3M9 MIR3180-1-201ENST00000580374 94 ntBASIC19.4■□□□□ 0.7
ATXN3LQ9H3M9 MIR3180-3-201ENST00000584616 94 ntBASIC19.4■□□□□ 0.7
ATXN3LQ9H3M9 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATXN3LQ9H3M9 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATXN3LQ9H3M9 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATXN3LQ9H3M9 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATXN3LQ9H3M9 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATXN3LQ9H3M9 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATXN3LQ9H3M9 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ATXN3LQ9H3M9 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.4■□□□□ 0.7
ATXN3LQ9H3M9 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.4■□□□□ 0.7
ATXN3LQ9H3M9 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATXN3LQ9H3M9 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATXN3LQ9H3M9 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.39■□□□□ 0.7
ATXN3LQ9H3M9 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
ATXN3LQ9H3M9 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.39■□□□□ 0.7
ATXN3LQ9H3M9 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
ATXN3LQ9H3M9 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.39■□□□□ 0.69
ATXN3LQ9H3M9 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATXN3LQ9H3M9 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ATXN3LQ9H3M9 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATXN3LQ9H3M9 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.39■□□□□ 0.69
ATXN3LQ9H3M9 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ATXN3LQ9H3M9 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.39■□□□□ 0.69
ATXN3LQ9H3M9 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATXN3LQ9H3M9 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
ATXN3LQ9H3M9 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
ATXN3LQ9H3M9 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.39■□□□□ 0.69
ATXN3LQ9H3M9 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.39■□□□□ 0.69
ATXN3LQ9H3M9 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.39■□□□□ 0.69
ATXN3LQ9H3M9 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.39■□□□□ 0.69
ATXN3LQ9H3M9 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATXN3LQ9H3M9 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.39■□□□□ 0.69
ATXN3LQ9H3M9 KRT18P1-202ENST00000452408 1331 ntBASIC19.39■□□□□ 0.69
ATXN3LQ9H3M9 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATXN3LQ9H3M9 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.39■□□□□ 0.69
ATXN3LQ9H3M9 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
ATXN3LQ9H3M9 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.39■□□□□ 0.69
ATXN3LQ9H3M9 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATXN3LQ9H3M9 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms