Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
NDNQ99608 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
NDNQ99608 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NDNQ99608 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NDNQ99608 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.56■□□□□ 0.56
NDNQ99608 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.56■□□□□ 0.56
NDNQ99608 AC096733.2-201ENST00000609937 1394 ntBASIC18.56■□□□□ 0.56
NDNQ99608 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDNQ99608 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDNQ99608 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDNQ99608 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.56■□□□□ 0.56
NDNQ99608 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDNQ99608 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
NDNQ99608 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDNQ99608 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDNQ99608 AC008556.1-201ENST00000610908 2040 ntBASIC18.56■□□□□ 0.56
NDNQ99608 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.56■□□□□ 0.56
NDNQ99608 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDNQ99608 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
NDNQ99608 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDNQ99608 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.56■□□□□ 0.56
NDNQ99608 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.56■□□□□ 0.56
NDNQ99608 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDNQ99608 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.56■□□□□ 0.56
NDNQ99608 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.56■□□□□ 0.56
NDNQ99608 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDNQ99608 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDNQ99608 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.56■□□□□ 0.56
NDNQ99608 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDNQ99608 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
NDNQ99608 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDNQ99608 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDNQ99608 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
NDNQ99608 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDNQ99608 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.55■□□□□ 0.56
NDNQ99608 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDNQ99608 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDNQ99608 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDNQ99608 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
NDNQ99608 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
NDNQ99608 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NDNQ99608 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
NDNQ99608 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.55■□□□□ 0.56
NDNQ99608 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NDNQ99608 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NDNQ99608 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDNQ99608 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDNQ99608 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NDNQ99608 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
NDNQ99608 AL354751.1-201ENST00000412768 1863 ntBASIC18.55■□□□□ 0.56
NDNQ99608 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NDNQ99608 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NDNQ99608 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDNQ99608 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.55■□□□□ 0.56
NDNQ99608 AC097488.1-201ENST00000507834 756 ntBASIC18.55■□□□□ 0.56
NDNQ99608 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.55■□□□□ 0.56
NDNQ99608 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.55■□□□□ 0.56
NDNQ99608 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.55■□□□□ 0.56
NDNQ99608 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.55■□□□□ 0.56
NDNQ99608 DGCR10-201ENST00000609839 495 ntBASIC18.55■□□□□ 0.56
NDNQ99608 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.55■□□□□ 0.56
NDNQ99608 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.55■□□□□ 0.56
NDNQ99608 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
NDNQ99608 AL139384.1-201ENST00000612143 3047 ntBASIC18.55■□□□□ 0.56
NDNQ99608 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
NDNQ99608 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDNQ99608 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDNQ99608 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
NDNQ99608 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.55■□□□□ 0.56
NDNQ99608 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NDNQ99608 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDNQ99608 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDNQ99608 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDNQ99608 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.54■□□□□ 0.56
NDNQ99608 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NDNQ99608 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDNQ99608 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDNQ99608 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDNQ99608 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDNQ99608 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDNQ99608 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NDNQ99608 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDNQ99608 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.54■□□□□ 0.56
NDNQ99608 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.54■□□□□ 0.56
NDNQ99608 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDNQ99608 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDNQ99608 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.54■□□□□ 0.56
NDNQ99608 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.54■□□□□ 0.56
NDNQ99608 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.54■□□□□ 0.56
NDNQ99608 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
NDNQ99608 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
NDNQ99608 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.54■□□□□ 0.56
NDNQ99608 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDNQ99608 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.54■□□□□ 0.56
NDNQ99608 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.54■□□□□ 0.56
NDNQ99608 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.54■□□□□ 0.56
NDNQ99608 AL355355.2-201ENST00000442321 338 ntBASIC18.54■□□□□ 0.56
NDNQ99608 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.54■□□□□ 0.56
NDNQ99608 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.54■□□□□ 0.56
NDNQ99608 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms