Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.19■□□□□ 0.66
CDK5RAP1Q96SZ6 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDK5RAP1Q96SZ6 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDK5RAP1Q96SZ6 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CDK5RAP1Q96SZ6 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.19■□□□□ 0.66
CDK5RAP1Q96SZ6 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.19■□□□□ 0.66
CDK5RAP1Q96SZ6 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CDK5RAP1Q96SZ6 AC069148.1-201ENST00000608741 768 ntBASIC19.19■□□□□ 0.66
CDK5RAP1Q96SZ6 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CDK5RAP1Q96SZ6 KRT89P-201ENST00000620027 1478 ntBASIC19.19■□□□□ 0.66
CDK5RAP1Q96SZ6 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDK5RAP1Q96SZ6 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.19■□□□□ 0.66
CDK5RAP1Q96SZ6 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDK5RAP1Q96SZ6 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDK5RAP1Q96SZ6 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDK5RAP1Q96SZ6 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.19■□□□□ 0.66
CDK5RAP1Q96SZ6 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CDK5RAP1Q96SZ6 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.18■□□□□ 0.66
CDK5RAP1Q96SZ6 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.18■□□□□ 0.66
CDK5RAP1Q96SZ6 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.18■□□□□ 0.66
CDK5RAP1Q96SZ6 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CDK5RAP1Q96SZ6 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.18■□□□□ 0.66
CDK5RAP1Q96SZ6 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.18■□□□□ 0.66
CDK5RAP1Q96SZ6 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CDK5RAP1Q96SZ6 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDK5RAP1Q96SZ6 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDK5RAP1Q96SZ6 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.18■□□□□ 0.66
CDK5RAP1Q96SZ6 KRT18P48-201ENST00000434763 852 ntBASIC19.18■□□□□ 0.66
CDK5RAP1Q96SZ6 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.18■□□□□ 0.66
CDK5RAP1Q96SZ6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.18■□□□□ 0.66
CDK5RAP1Q96SZ6 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.18■□□□□ 0.66
CDK5RAP1Q96SZ6 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.18■□□□□ 0.66
CDK5RAP1Q96SZ6 AC011498.5-201ENST00000592027 486 ntBASIC19.18■□□□□ 0.66
CDK5RAP1Q96SZ6 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CDK5RAP1Q96SZ6 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDK5RAP1Q96SZ6 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.18■□□□□ 0.66
CDK5RAP1Q96SZ6 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDK5RAP1Q96SZ6 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDK5RAP1Q96SZ6 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.18■□□□□ 0.66
CDK5RAP1Q96SZ6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDK5RAP1Q96SZ6 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDK5RAP1Q96SZ6 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.17■□□□□ 0.66
CDK5RAP1Q96SZ6 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDK5RAP1Q96SZ6 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.17■□□□□ 0.66
CDK5RAP1Q96SZ6 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDK5RAP1Q96SZ6 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDK5RAP1Q96SZ6 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.17■□□□□ 0.66
CDK5RAP1Q96SZ6 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDK5RAP1Q96SZ6 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.17■□□□□ 0.66
CDK5RAP1Q96SZ6 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDK5RAP1Q96SZ6 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.17■□□□□ 0.66
CDK5RAP1Q96SZ6 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CDK5RAP1Q96SZ6 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.17■□□□□ 0.66
CDK5RAP1Q96SZ6 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.17■□□□□ 0.66
CDK5RAP1Q96SZ6 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.17■□□□□ 0.66
CDK5RAP1Q96SZ6 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.17■□□□□ 0.66
CDK5RAP1Q96SZ6 AC024563.2-201ENST00000603282 481 ntBASIC19.17■□□□□ 0.66
CDK5RAP1Q96SZ6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.17■□□□□ 0.66
CDK5RAP1Q96SZ6 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CDK5RAP1Q96SZ6 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CDK5RAP1Q96SZ6 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDK5RAP1Q96SZ6 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDK5RAP1Q96SZ6 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDK5RAP1Q96SZ6 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDK5RAP1Q96SZ6 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDK5RAP1Q96SZ6 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDK5RAP1Q96SZ6 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDK5RAP1Q96SZ6 ANO7L1-203ENST00000602586 1720 ntBASIC19.17■□□□□ 0.66
CDK5RAP1Q96SZ6 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDK5RAP1Q96SZ6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDK5RAP1Q96SZ6 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDK5RAP1Q96SZ6 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDK5RAP1Q96SZ6 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDK5RAP1Q96SZ6 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.16■□□□□ 0.66
CDK5RAP1Q96SZ6 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDK5RAP1Q96SZ6 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDK5RAP1Q96SZ6 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDK5RAP1Q96SZ6 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.16■□□□□ 0.66
CDK5RAP1Q96SZ6 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDK5RAP1Q96SZ6 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDK5RAP1Q96SZ6 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.16■□□□□ 0.66
CDK5RAP1Q96SZ6 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.16■□□□□ 0.66
CDK5RAP1Q96SZ6 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.16■□□□□ 0.66
CDK5RAP1Q96SZ6 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.16■□□□□ 0.66
CDK5RAP1Q96SZ6 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.16■□□□□ 0.66
CDK5RAP1Q96SZ6 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDK5RAP1Q96SZ6 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDK5RAP1Q96SZ6 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
CDK5RAP1Q96SZ6 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDK5RAP1Q96SZ6 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.16■□□□□ 0.66
CDK5RAP1Q96SZ6 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.16■□□□□ 0.66
CDK5RAP1Q96SZ6 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDK5RAP1Q96SZ6 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDK5RAP1Q96SZ6 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDK5RAP1Q96SZ6 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDK5RAP1Q96SZ6 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
CDK5RAP1Q96SZ6 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDK5RAP1Q96SZ6 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDK5RAP1Q96SZ6 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDK5RAP1Q96SZ6 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms