Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.87■□□□□ 0.29
SNX18Q96RF0 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.87■□□□□ 0.29
SNX18Q96RF0 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SNX18Q96RF0 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.87■□□□□ 0.29
SNX18Q96RF0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.87■□□□□ 0.29
SNX18Q96RF0 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SNX18Q96RF0 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.87■□□□□ 0.29
SNX18Q96RF0 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX18Q96RF0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX18Q96RF0 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX18Q96RF0 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX18Q96RF0 HEIH-201ENST00000623091 1652 ntBASIC16.87■□□□□ 0.29
SNX18Q96RF0 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX18Q96RF0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX18Q96RF0 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SNX18Q96RF0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.87■□□□□ 0.29
SNX18Q96RF0 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SNX18Q96RF0 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX18Q96RF0 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.87■□□□□ 0.29
SNX18Q96RF0 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
SNX18Q96RF0 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX18Q96RF0 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SNX18Q96RF0 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
SNX18Q96RF0 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNX18Q96RF0 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNX18Q96RF0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.86■□□□□ 0.29
SNX18Q96RF0 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.86■□□□□ 0.29
SNX18Q96RF0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNX18Q96RF0 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SNX18Q96RF0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SNX18Q96RF0 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SNX18Q96RF0 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SNX18Q96RF0 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
SNX18Q96RF0 AL353807.1-201ENST00000427475 662 ntBASIC16.86■□□□□ 0.29
SNX18Q96RF0 SNORA78-201ENST00000459373 127 ntBASIC16.86■□□□□ 0.29
SNX18Q96RF0 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SNX18Q96RF0 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.86■□□□□ 0.29
SNX18Q96RF0 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.86■□□□□ 0.29
SNX18Q96RF0 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNX18Q96RF0 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.86■□□□□ 0.29
SNX18Q96RF0 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.86■□□□□ 0.29
SNX18Q96RF0 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNX18Q96RF0 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNX18Q96RF0 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SNX18Q96RF0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNX18Q96RF0 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNX18Q96RF0 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNX18Q96RF0 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SNX18Q96RF0 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNX18Q96RF0 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNX18Q96RF0 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.86■□□□□ 0.29
SNX18Q96RF0 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNX18Q96RF0 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX18Q96RF0 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.85■□□□□ 0.29
SNX18Q96RF0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SNX18Q96RF0 RCC2P6-201ENST00000526625 1557 ntBASIC16.85■□□□□ 0.29
SNX18Q96RF0 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX18Q96RF0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX18Q96RF0 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX18Q96RF0 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SNX18Q96RF0 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX18Q96RF0 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX18Q96RF0 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
SNX18Q96RF0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SNX18Q96RF0 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX18Q96RF0 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.85■□□□□ 0.29
SNX18Q96RF0 KSR1P1-201ENST00000446298 240 ntBASIC16.85■□□□□ 0.29
SNX18Q96RF0 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.85■□□□□ 0.29
SNX18Q96RF0 MIR4497-201ENST00000583208 89 ntBASIC16.85■□□□□ 0.29
SNX18Q96RF0 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.85■□□□□ 0.29
SNX18Q96RF0 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SNX18Q96RF0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.85■□□□□ 0.29
SNX18Q96RF0 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX18Q96RF0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.85■□□□□ 0.29
SNX18Q96RF0 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX18Q96RF0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX18Q96RF0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX18Q96RF0 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SNX18Q96RF0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX18Q96RF0 KRT8P11-201ENST00000409686 1436 ntBASIC16.85■□□□□ 0.29
SNX18Q96RF0 KRT8P3-201ENST00000519669 1449 ntBASIC16.85■□□□□ 0.29
SNX18Q96RF0 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
SNX18Q96RF0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
SNX18Q96RF0 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX18Q96RF0 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX18Q96RF0 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.85■□□□□ 0.29
SNX18Q96RF0 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SNX18Q96RF0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SNX18Q96RF0 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
SNX18Q96RF0 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX18Q96RF0 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
SNX18Q96RF0 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNX18Q96RF0 AC084018.2-201ENST00000613093 2607 ntBASIC16.84■□□□□ 0.29
SNX18Q96RF0 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNX18Q96RF0 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX18Q96RF0 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX18Q96RF0 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SNX18Q96RF0 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SNX18Q96RF0 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX18Q96RF0 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms