Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.39■□□□□ 0.05
GAFA1Q96PS6 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GAFA1Q96PS6 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
GAFA1Q96PS6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC15.39■□□□□ 0.05
GAFA1Q96PS6 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GAFA1Q96PS6 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GAFA1Q96PS6 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC15.39■□□□□ 0.05
GAFA1Q96PS6 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.39■□□□□ 0.05
GAFA1Q96PS6 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GAFA1Q96PS6 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GAFA1Q96PS6 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.38■□□□□ 0.05
GAFA1Q96PS6 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GAFA1Q96PS6 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
GAFA1Q96PS6 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
GAFA1Q96PS6 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GAFA1Q96PS6 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
GAFA1Q96PS6 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
GAFA1Q96PS6 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC15.38■□□□□ 0.05
GAFA1Q96PS6 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
GAFA1Q96PS6 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GAFA1Q96PS6 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
GAFA1Q96PS6 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
GAFA1Q96PS6 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
GAFA1Q96PS6 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GAFA1Q96PS6 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
GAFA1Q96PS6 MIR149-201ENST00000384879 89 ntBASIC15.38■□□□□ 0.05
GAFA1Q96PS6 AK4P3-201ENST00000418260 669 ntBASIC15.38■□□□□ 0.05
GAFA1Q96PS6 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.38■□□□□ 0.05
GAFA1Q96PS6 AC104076.2-201ENST00000448912 469 ntBASIC15.38■□□□□ 0.05
GAFA1Q96PS6 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.38■□□□□ 0.05
GAFA1Q96PS6 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.38■□□□□ 0.05
GAFA1Q96PS6 AC009065.1-201ENST00000564055 1225 ntBASIC15.38■□□□□ 0.05
GAFA1Q96PS6 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
GAFA1Q96PS6 MIR3917-201ENST00000580971 93 ntBASIC15.38■□□□□ 0.05
GAFA1Q96PS6 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
GAFA1Q96PS6 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
GAFA1Q96PS6 AC090164.3-201ENST00000610780 2143 ntBASIC15.38■□□□□ 0.05
GAFA1Q96PS6 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
GAFA1Q96PS6 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
GAFA1Q96PS6 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
GAFA1Q96PS6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GAFA1Q96PS6 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GAFA1Q96PS6 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC15.38■□□□□ 0.05
GAFA1Q96PS6 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
GAFA1Q96PS6 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
GAFA1Q96PS6 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC15.38■□□□□ 0.05
GAFA1Q96PS6 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 RNF152P1-201ENST00000397754 604 ntBASIC15.37■□□□□ 0.05
GAFA1Q96PS6 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 AL157888.1-201ENST00000631930 593 ntBASIC15.37■□□□□ 0.05
GAFA1Q96PS6 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 AC009102.3-201ENST00000623118 1491 ntBASIC15.37■□□□□ 0.05
GAFA1Q96PS6 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GAFA1Q96PS6 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GAFA1Q96PS6 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms