Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3BQ96NU0 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.65■□□□□ 0.42
CNTNAP3BQ96NU0 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CNTNAP3BQ96NU0 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3BQ96NU0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3BQ96NU0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.65■□□□□ 0.42
CNTNAP3BQ96NU0 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3BQ96NU0 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3BQ96NU0 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3BQ96NU0 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CNTNAP3BQ96NU0 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3BQ96NU0 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3BQ96NU0 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3BQ96NU0 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3BQ96NU0 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3BQ96NU0 RN7SL606P-201ENST00000472779 293 ntBASIC17.65■□□□□ 0.42
CNTNAP3BQ96NU0 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.65■□□□□ 0.42
CNTNAP3BQ96NU0 MTDHP3-201ENST00000594186 672 ntBASIC17.65■□□□□ 0.42
CNTNAP3BQ96NU0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.65■□□□□ 0.42
CNTNAP3BQ96NU0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3BQ96NU0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.65■□□□□ 0.42
CNTNAP3BQ96NU0 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3BQ96NU0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.65■□□□□ 0.42
CNTNAP3BQ96NU0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3BQ96NU0 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3BQ96NU0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3BQ96NU0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3BQ96NU0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3BQ96NU0 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.65■□□□□ 0.42
CNTNAP3BQ96NU0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP3BQ96NU0 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CNTNAP3BQ96NU0 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP3BQ96NU0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP3BQ96NU0 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP3BQ96NU0 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP3BQ96NU0 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.64■□□□□ 0.41
CNTNAP3BQ96NU0 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP3BQ96NU0 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP3BQ96NU0 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CNTNAP3BQ96NU0 YBX1P5-201ENST00000509441 847 ntBASIC17.64■□□□□ 0.41
CNTNAP3BQ96NU0 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CNTNAP3BQ96NU0 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.64■□□□□ 0.41
CNTNAP3BQ96NU0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.64■□□□□ 0.41
CNTNAP3BQ96NU0 AC009533.2-201ENST00000543664 586 ntBASIC17.64■□□□□ 0.41
CNTNAP3BQ96NU0 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.64■□□□□ 0.41
CNTNAP3BQ96NU0 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.64■□□□□ 0.41
CNTNAP3BQ96NU0 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.64■□□□□ 0.41
CNTNAP3BQ96NU0 BNIP3P18-201ENST00000593976 575 ntBASIC17.64■□□□□ 0.41
CNTNAP3BQ96NU0 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.64■□□□□ 0.41
CNTNAP3BQ96NU0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.64■□□□□ 0.41
CNTNAP3BQ96NU0 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP3BQ96NU0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP3BQ96NU0 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP3BQ96NU0 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP3BQ96NU0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP3BQ96NU0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.64■□□□□ 0.41
CNTNAP3BQ96NU0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP3BQ96NU0 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.64■□□□□ 0.41
CNTNAP3BQ96NU0 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP3BQ96NU0 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.64■□□□□ 0.41
CNTNAP3BQ96NU0 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP3BQ96NU0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP3BQ96NU0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.64■□□□□ 0.41
CNTNAP3BQ96NU0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CNTNAP3BQ96NU0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNTNAP3BQ96NU0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CNTNAP3BQ96NU0 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.63■□□□□ 0.41
CNTNAP3BQ96NU0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.63■□□□□ 0.41
CNTNAP3BQ96NU0 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CNTNAP3BQ96NU0 PHGDH-210ENST00000641115 1638 ntBASIC17.63■□□□□ 0.41
CNTNAP3BQ96NU0 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNTNAP3BQ96NU0 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNTNAP3BQ96NU0 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.63■□□□□ 0.41
CNTNAP3BQ96NU0 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CNTNAP3BQ96NU0 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
CNTNAP3BQ96NU0 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.63■□□□□ 0.41
CNTNAP3BQ96NU0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.63■□□□□ 0.41
CNTNAP3BQ96NU0 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
CNTNAP3BQ96NU0 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.63■□□□□ 0.41
CNTNAP3BQ96NU0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.63■□□□□ 0.41
CNTNAP3BQ96NU0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CNTNAP3BQ96NU0 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.63■□□□□ 0.41
CNTNAP3BQ96NU0 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CNTNAP3BQ96NU0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CNTNAP3BQ96NU0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNTNAP3BQ96NU0 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CNTNAP3BQ96NU0 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.63■□□□□ 0.41
CNTNAP3BQ96NU0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNTNAP3BQ96NU0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNTNAP3BQ96NU0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNTNAP3BQ96NU0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.63■□□□□ 0.41
CNTNAP3BQ96NU0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNTNAP3BQ96NU0 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.63■□□□□ 0.41
CNTNAP3BQ96NU0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNTNAP3BQ96NU0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CNTNAP3BQ96NU0 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNTNAP3BQ96NU0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNTNAP3BQ96NU0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNTNAP3BQ96NU0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CNTNAP3BQ96NU0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms