Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
TRIM41Q8WV44 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC31.65■■■□□ 2.66
TRIM41Q8WV44 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC31.65■■■□□ 2.66
TRIM41Q8WV44 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
TRIM41Q8WV44 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
TRIM41Q8WV44 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC31.64■■■□□ 2.66
TRIM41Q8WV44 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
TRIM41Q8WV44 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC31.64■■■□□ 2.66
TRIM41Q8WV44 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC31.64■■■□□ 2.66
TRIM41Q8WV44 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC31.64■■■□□ 2.66
TRIM41Q8WV44 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC31.64■■■□□ 2.66
TRIM41Q8WV44 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
TRIM41Q8WV44 AC004967.1-201ENST00000453589 447 ntBASIC31.64■■■□□ 2.66
TRIM41Q8WV44 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC31.64■■■□□ 2.66
TRIM41Q8WV44 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC31.64■■■□□ 2.66
TRIM41Q8WV44 AC024243.1-201ENST00000609234 778 ntBASIC31.64■■■□□ 2.66
TRIM41Q8WV44 TP73-AS1-207ENST00000624167 988 ntBASIC31.64■■■□□ 2.66
TRIM41Q8WV44 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC31.64■■■□□ 2.66
TRIM41Q8WV44 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC31.64■■■□□ 2.66
TRIM41Q8WV44 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC31.64■■■□□ 2.66
TRIM41Q8WV44 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
TRIM41Q8WV44 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
TRIM41Q8WV44 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC31.63■■■□□ 2.65
TRIM41Q8WV44 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC31.63■■■□□ 2.65
TRIM41Q8WV44 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC31.63■■■□□ 2.65
TRIM41Q8WV44 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
TRIM41Q8WV44 AKR1C7P-201ENST00000305623 895 ntBASIC31.63■■■□□ 2.65
TRIM41Q8WV44 ENSA-205ENST00000361532 792 ntTSL 2 BASIC31.63■■■□□ 2.65
TRIM41Q8WV44 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
TRIM41Q8WV44 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
TRIM41Q8WV44 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC31.63■■■□□ 2.65
TRIM41Q8WV44 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
TRIM41Q8WV44 RPL18-209ENST00000550645 463 ntTSL 5 BASIC31.63■■■□□ 2.65
TRIM41Q8WV44 RPL18-214ENST00000552588 559 ntTSL 3 BASIC31.63■■■□□ 2.65
TRIM41Q8WV44 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC31.63■■■□□ 2.65
TRIM41Q8WV44 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
TRIM41Q8WV44 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
TRIM41Q8WV44 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
TRIM41Q8WV44 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC31.63■■■□□ 2.65
TRIM41Q8WV44 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
TRIM41Q8WV44 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
TRIM41Q8WV44 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
TRIM41Q8WV44 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
TRIM41Q8WV44 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC31.63■■■□□ 2.65
TRIM41Q8WV44 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
TRIM41Q8WV44 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
TRIM41Q8WV44 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
TRIM41Q8WV44 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
TRIM41Q8WV44 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
TRIM41Q8WV44 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC31.62■■■□□ 2.65
TRIM41Q8WV44 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC31.62■■■□□ 2.65
TRIM41Q8WV44 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC31.62■■■□□ 2.65
TRIM41Q8WV44 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC31.62■■■□□ 2.65
TRIM41Q8WV44 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC31.62■■■□□ 2.65
TRIM41Q8WV44 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
TRIM41Q8WV44 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC31.62■■■□□ 2.65
TRIM41Q8WV44 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC31.62■■■□□ 2.65
TRIM41Q8WV44 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC31.62■■■□□ 2.65
TRIM41Q8WV44 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
TRIM41Q8WV44 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
TRIM41Q8WV44 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
TRIM41Q8WV44 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC31.61■■■□□ 2.65
TRIM41Q8WV44 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC31.61■■■□□ 2.65
TRIM41Q8WV44 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
TRIM41Q8WV44 AC245100.3-201ENST00000441281 285 ntBASIC31.61■■■□□ 2.65
TRIM41Q8WV44 RPL13AP23-201ENST00000480739 586 ntBASIC31.61■■■□□ 2.65
TRIM41Q8WV44 AC138894.3-201ENST00000603787 634 ntBASIC31.61■■■□□ 2.65
TRIM41Q8WV44 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
TRIM41Q8WV44 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
TRIM41Q8WV44 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
TRIM41Q8WV44 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
TRIM41Q8WV44 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
TRIM41Q8WV44 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC31.6■■■□□ 2.65
TRIM41Q8WV44 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC31.6■■■□□ 2.65
TRIM41Q8WV44 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
TRIM41Q8WV44 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC31.6■■■□□ 2.65
TRIM41Q8WV44 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
TRIM41Q8WV44 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
TRIM41Q8WV44 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC31.6■■■□□ 2.65
TRIM41Q8WV44 GPX1P2-201ENST00000429271 606 ntBASIC31.6■■■□□ 2.65
TRIM41Q8WV44 AC092597.1-201ENST00000487352 616 ntBASIC31.6■■■□□ 2.65
TRIM41Q8WV44 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC31.6■■■□□ 2.65
TRIM41Q8WV44 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC31.6■■■□□ 2.65
TRIM41Q8WV44 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC31.6■■■□□ 2.65
TRIM41Q8WV44 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC31.6■■■□□ 2.65
TRIM41Q8WV44 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
TRIM41Q8WV44 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
TRIM41Q8WV44 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
TRIM41Q8WV44 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
TRIM41Q8WV44 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
TRIM41Q8WV44 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
TRIM41Q8WV44 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC31.59■■■□□ 2.65
TRIM41Q8WV44 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC31.59■■■□□ 2.65
TRIM41Q8WV44 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
TRIM41Q8WV44 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
TRIM41Q8WV44 AC243591.1-201ENST00000452967 1364 ntBASIC31.59■■■□□ 2.65
TRIM41Q8WV44 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
TRIM41Q8WV44 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
TRIM41Q8WV44 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC31.59■■■□□ 2.65
TRIM41Q8WV44 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms