Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
FNDC9Q8TBE3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
FNDC9Q8TBE3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.67■□□□□ 0.26
FNDC9Q8TBE3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.67■□□□□ 0.26
FNDC9Q8TBE3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
FNDC9Q8TBE3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
FNDC9Q8TBE3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FNDC9Q8TBE3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
FNDC9Q8TBE3 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FNDC9Q8TBE3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
FNDC9Q8TBE3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
FNDC9Q8TBE3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.66■□□□□ 0.26
FNDC9Q8TBE3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
FNDC9Q8TBE3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
FNDC9Q8TBE3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FNDC9Q8TBE3 HEIH-201ENST00000623091 1652 ntBASIC16.66■□□□□ 0.26
FNDC9Q8TBE3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FNDC9Q8TBE3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FNDC9Q8TBE3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FNDC9Q8TBE3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FNDC9Q8TBE3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FNDC9Q8TBE3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
FNDC9Q8TBE3 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FNDC9Q8TBE3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
FNDC9Q8TBE3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.66■□□□□ 0.26
FNDC9Q8TBE3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
FNDC9Q8TBE3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
FNDC9Q8TBE3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
FNDC9Q8TBE3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.66■□□□□ 0.26
FNDC9Q8TBE3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
FNDC9Q8TBE3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.66■□□□□ 0.26
FNDC9Q8TBE3 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
FNDC9Q8TBE3 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.66■□□□□ 0.26
FNDC9Q8TBE3 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.66■□□□□ 0.26
FNDC9Q8TBE3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FNDC9Q8TBE3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FNDC9Q8TBE3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FNDC9Q8TBE3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
FNDC9Q8TBE3 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FNDC9Q8TBE3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FNDC9Q8TBE3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.66■□□□□ 0.26
FNDC9Q8TBE3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FNDC9Q8TBE3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FNDC9Q8TBE3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
FNDC9Q8TBE3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 STARP1-201ENST00000397973 869 ntBASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 SPDYE15P-201ENST00000424157 909 ntBASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 KRT18P23-201ENST00000435622 1283 ntBASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.65■□□□□ 0.26
FNDC9Q8TBE3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.64■□□□□ 0.26
FNDC9Q8TBE3 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms