Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DNAAF1Q8NEP3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
DNAAF1Q8NEP3 HEIH-201ENST00000623091 1652 ntBASIC16.31■□□□□ 0.2
DNAAF1Q8NEP3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
DNAAF1Q8NEP3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DNAAF1Q8NEP3 AL162741.1-201ENST00000565563 1558 ntBASIC16.31■□□□□ 0.2
DNAAF1Q8NEP3 AC012313.1-201ENST00000593393 3059 ntBASIC16.31■□□□□ 0.2
DNAAF1Q8NEP3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.31■□□□□ 0.2
DNAAF1Q8NEP3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.31■□□□□ 0.2
DNAAF1Q8NEP3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.31■□□□□ 0.2
DNAAF1Q8NEP3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.31■□□□□ 0.2
DNAAF1Q8NEP3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.31■□□□□ 0.2
DNAAF1Q8NEP3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
DNAAF1Q8NEP3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.31■□□□□ 0.2
DNAAF1Q8NEP3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DNAAF1Q8NEP3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.31■□□□□ 0.2
DNAAF1Q8NEP3 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
DNAAF1Q8NEP3 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DNAAF1Q8NEP3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.31■□□□□ 0.2
DNAAF1Q8NEP3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.31■□□□□ 0.2
DNAAF1Q8NEP3 KRT16P5-201ENST00000455284 522 ntBASIC16.31■□□□□ 0.2
DNAAF1Q8NEP3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
DNAAF1Q8NEP3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.31■□□□□ 0.2
DNAAF1Q8NEP3 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DNAAF1Q8NEP3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DNAAF1Q8NEP3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DNAAF1Q8NEP3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DNAAF1Q8NEP3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.31■□□□□ 0.2
DNAAF1Q8NEP3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DNAAF1Q8NEP3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DNAAF1Q8NEP3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
DNAAF1Q8NEP3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
DNAAF1Q8NEP3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
DNAAF1Q8NEP3 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
DNAAF1Q8NEP3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DNAAF1Q8NEP3 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
DNAAF1Q8NEP3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DNAAF1Q8NEP3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DNAAF1Q8NEP3 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DNAAF1Q8NEP3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DNAAF1Q8NEP3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DNAAF1Q8NEP3 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DNAAF1Q8NEP3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.3■□□□□ 0.2
DNAAF1Q8NEP3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
DNAAF1Q8NEP3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.3■□□□□ 0.2
DNAAF1Q8NEP3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.3■□□□□ 0.2
DNAAF1Q8NEP3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.3■□□□□ 0.2
DNAAF1Q8NEP3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.3■□□□□ 0.2
DNAAF1Q8NEP3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
DNAAF1Q8NEP3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
DNAAF1Q8NEP3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DNAAF1Q8NEP3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DNAAF1Q8NEP3 AC135776.1-201ENST00000319817 2481 ntBASIC16.3■□□□□ 0.2
DNAAF1Q8NEP3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
DNAAF1Q8NEP3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.3■□□□□ 0.2
DNAAF1Q8NEP3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.3■□□□□ 0.2
DNAAF1Q8NEP3 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DNAAF1Q8NEP3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DNAAF1Q8NEP3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DNAAF1Q8NEP3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.3■□□□□ 0.2
DNAAF1Q8NEP3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
DNAAF1Q8NEP3 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DNAAF1Q8NEP3 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
DNAAF1Q8NEP3 OR6D1P-202ENST00000641007 5290 ntBASIC16.3■□□□□ 0.2
DNAAF1Q8NEP3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DNAAF1Q8NEP3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
DNAAF1Q8NEP3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.3■□□□□ 0.2
DNAAF1Q8NEP3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DNAAF1Q8NEP3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.29■□□□□ 0.2
DNAAF1Q8NEP3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DNAAF1Q8NEP3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DNAAF1Q8NEP3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DNAAF1Q8NEP3 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DNAAF1Q8NEP3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
DNAAF1Q8NEP3 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
DNAAF1Q8NEP3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.29■□□□□ 0.2
DNAAF1Q8NEP3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DNAAF1Q8NEP3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DNAAF1Q8NEP3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.29■□□□□ 0.2
DNAAF1Q8NEP3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DNAAF1Q8NEP3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DNAAF1Q8NEP3 PRORSD1P-202ENST00000563365 2154 ntBASIC16.29■□□□□ 0.2
DNAAF1Q8NEP3 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DNAAF1Q8NEP3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DNAAF1Q8NEP3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DNAAF1Q8NEP3 AC239809.2-201ENST00000415381 517 ntBASIC16.29■□□□□ 0.2
DNAAF1Q8NEP3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.29■□□□□ 0.2
DNAAF1Q8NEP3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DNAAF1Q8NEP3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.29■□□□□ 0.2
DNAAF1Q8NEP3 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DNAAF1Q8NEP3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DNAAF1Q8NEP3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
DNAAF1Q8NEP3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
DNAAF1Q8NEP3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DNAAF1Q8NEP3 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DNAAF1Q8NEP3 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.29■□□□□ 0.2
DNAAF1Q8NEP3 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
DNAAF1Q8NEP3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DNAAF1Q8NEP3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DNAAF1Q8NEP3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms