Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
COLGALT1Q8NBJ5 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COLGALT1Q8NBJ5 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
COLGALT1Q8NBJ5 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
COLGALT1Q8NBJ5 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.92■□□□□ 0.78
COLGALT1Q8NBJ5 AC034236.2-201ENST00000606662 1610 ntBASIC19.92■□□□□ 0.78
COLGALT1Q8NBJ5 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
COLGALT1Q8NBJ5 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COLGALT1Q8NBJ5 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.92■□□□□ 0.78
COLGALT1Q8NBJ5 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
COLGALT1Q8NBJ5 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.92■□□□□ 0.78
COLGALT1Q8NBJ5 AL160237.2-201ENST00000556165 472 ntBASIC19.92■□□□□ 0.78
COLGALT1Q8NBJ5 AC074051.2-201ENST00000565115 352 ntBASIC19.92■□□□□ 0.78
COLGALT1Q8NBJ5 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COLGALT1Q8NBJ5 FEM1AP3-201ENST00000403722 1741 ntBASIC19.92■□□□□ 0.78
COLGALT1Q8NBJ5 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COLGALT1Q8NBJ5 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COLGALT1Q8NBJ5 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.92■□□□□ 0.78
COLGALT1Q8NBJ5 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.92■□□□□ 0.78
COLGALT1Q8NBJ5 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COLGALT1Q8NBJ5 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.91■□□□□ 0.78
COLGALT1Q8NBJ5 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COLGALT1Q8NBJ5 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.91■□□□□ 0.78
COLGALT1Q8NBJ5 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COLGALT1Q8NBJ5 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.91■□□□□ 0.78
COLGALT1Q8NBJ5 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.91■□□□□ 0.78
COLGALT1Q8NBJ5 GPR32P1-201ENST00000601788 811 ntBASIC19.91■□□□□ 0.78
COLGALT1Q8NBJ5 AC138894.3-201ENST00000603787 634 ntBASIC19.91■□□□□ 0.78
COLGALT1Q8NBJ5 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COLGALT1Q8NBJ5 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COLGALT1Q8NBJ5 AC018445.3-201ENST00000624177 1945 ntBASIC19.91■□□□□ 0.78
COLGALT1Q8NBJ5 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COLGALT1Q8NBJ5 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
COLGALT1Q8NBJ5 AC006333.2-201ENST00000607957 2099 ntBASIC19.91■□□□□ 0.78
COLGALT1Q8NBJ5 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COLGALT1Q8NBJ5 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
COLGALT1Q8NBJ5 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.91■□□□□ 0.78
COLGALT1Q8NBJ5 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.91■□□□□ 0.78
COLGALT1Q8NBJ5 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COLGALT1Q8NBJ5 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COLGALT1Q8NBJ5 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COLGALT1Q8NBJ5 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COLGALT1Q8NBJ5 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COLGALT1Q8NBJ5 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
COLGALT1Q8NBJ5 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COLGALT1Q8NBJ5 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
COLGALT1Q8NBJ5 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COLGALT1Q8NBJ5 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.9■□□□□ 0.78
COLGALT1Q8NBJ5 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COLGALT1Q8NBJ5 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COLGALT1Q8NBJ5 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COLGALT1Q8NBJ5 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
COLGALT1Q8NBJ5 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.9■□□□□ 0.78
COLGALT1Q8NBJ5 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COLGALT1Q8NBJ5 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.9■□□□□ 0.78
COLGALT1Q8NBJ5 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.9■□□□□ 0.78
COLGALT1Q8NBJ5 MIR3180-4-201ENST00000582223 153 ntBASIC19.9■□□□□ 0.78
COLGALT1Q8NBJ5 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.9■□□□□ 0.78
COLGALT1Q8NBJ5 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.9■□□□□ 0.78
COLGALT1Q8NBJ5 AC233702.3-201ENST00000578656 1387 ntBASIC19.9■□□□□ 0.78
COLGALT1Q8NBJ5 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COLGALT1Q8NBJ5 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COLGALT1Q8NBJ5 LINC00167-201ENST00000530583 1419 ntBASIC19.9■□□□□ 0.78
COLGALT1Q8NBJ5 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COLGALT1Q8NBJ5 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
COLGALT1Q8NBJ5 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COLGALT1Q8NBJ5 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.9■□□□□ 0.78
COLGALT1Q8NBJ5 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COLGALT1Q8NBJ5 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COLGALT1Q8NBJ5 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COLGALT1Q8NBJ5 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COLGALT1Q8NBJ5 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COLGALT1Q8NBJ5 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
COLGALT1Q8NBJ5 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.9■□□□□ 0.78
COLGALT1Q8NBJ5 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.9■□□□□ 0.78
COLGALT1Q8NBJ5 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.9■□□□□ 0.78
COLGALT1Q8NBJ5 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.9■□□□□ 0.78
COLGALT1Q8NBJ5 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.9■□□□□ 0.78
COLGALT1Q8NBJ5 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
COLGALT1Q8NBJ5 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
COLGALT1Q8NBJ5 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
COLGALT1Q8NBJ5 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COLGALT1Q8NBJ5 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COLGALT1Q8NBJ5 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COLGALT1Q8NBJ5 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COLGALT1Q8NBJ5 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COLGALT1Q8NBJ5 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.89■□□□□ 0.77
COLGALT1Q8NBJ5 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COLGALT1Q8NBJ5 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.89■□□□□ 0.77
COLGALT1Q8NBJ5 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
COLGALT1Q8NBJ5 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.89■□□□□ 0.77
COLGALT1Q8NBJ5 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.89■□□□□ 0.77
COLGALT1Q8NBJ5 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.89■□□□□ 0.77
COLGALT1Q8NBJ5 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COLGALT1Q8NBJ5 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.89■□□□□ 0.77
COLGALT1Q8NBJ5 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COLGALT1Q8NBJ5 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.89■□□□□ 0.77
COLGALT1Q8NBJ5 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COLGALT1Q8NBJ5 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
COLGALT1Q8NBJ5 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms